BS12210.complete Sequence
461 bp assembled on 2006-11-01
GenBank Submission: FJ637097
> BS12210.complete
GAAGTTATCAGTCGACATGCAGCGACAGATTATTAACATTCTGGGACAGA
CGACGCGTCGCCTGGCTAGCGGCCAGCAAATTCGCATGCTGTCAGTTTCT
GCGCCGCGACAGGAGATCTTCAAAGTCCAGAGCGCCGAGGACTTTGACAA
GAAAGTAAAGAACAGCCAGCAGCCCGTGATTGTGGACTTCTTCGCAACCT
GGTGCAATCCCTGCAAGCTGCTAACCCCGCGCATCGAGAGTATTGTGGGC
GAACAGGCCGGTTCCATCAAGCTGGCCAAGGTGGACATAGATGAGCACAG
CGAACTGGCTCTGGACTACGATGTGGCCGCCGTGCCCGTGCTAGTGGTGC
TGCAGAACGGCAAGGAGGTGCAGCGCATGGTGGGACTCCAGGACGAGGAC
AAAATCCGGGCCTGGGTTGCCGCCGCCGTCAAACAGGCCAAGTAAAAGCT
TTCTAGACCAT
BS12210.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 19:44:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8993-RA | 429 | CG8993-PA | 1..429 | 17..445 | 2145 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 19:44:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8993-RA | 616 | CG8993-RA | 83..512 | 16..445 | 2150 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 19:44:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 2372526..2372772 | 199..445 | 1235 | 100 | Plus |
3L | 28110227 | 3L | 2372281..2372463 | 16..198 | 915 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 19:44:56 has no hits.
BS12210.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:47:27 Download gff for
BS12210.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8993-RA | 1..429 | 17..445 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:35:23 Download gff for
BS12210.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8993-RA | 77..517 | 7..451 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:02:50 Download gff for
BS12210.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8993-RA | 84..510 | 17..443 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:47:27 Download gff for
BS12210.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8993-RA | 77..517 | 7..451 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:07:35 Download gff for
BS12210.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8993-RA | 84..510 | 17..443 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:07:35 Download gff for
BS12210.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 2372282..2372463 | 17..198 | 100 | -> | Plus |
3L | 2372526..2372770 | 199..443 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:02:50 Download gff for
BS12210.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 2372526..2372770 | 199..443 | 100 | | Plus |
arm_3L | 2372282..2372463 | 17..198 | 100 | -> | Plus |
BS12210.pep Sequence
Translation from 16 to 444
> BS12210.pep
MQRQIINILGQTTRRLASGQQIRMLSVSAPRQEIFKVQSAEDFDKKVKNS
QQPVIVDFFATWCNPCKLLTPRIESIVGEQAGSIKLAKVDIDEHSELALD
YDVAAVPVLVVLQNGKEVQRMVGLQDEDKIRAWVAAAVKQAK*
BS12210.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:26:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8993-PA | 142 | CG8993-PA | 1..142 | 1..142 | 708 | 100 | Plus |
CG8517-PA | 145 | CG8517-PA | 11..135 | 14..138 | 347 | 52 | Plus |
CG3719-PA | 160 | CG3719-PA | 34..149 | 17..134 | 208 | 36.4 | Plus |
Trx-2-PA | 106 | CG31884-PA | 2..104 | 34..132 | 197 | 35 | Plus |
Trx-2-PB | 106 | CG31884-PB | 2..104 | 34..132 | 197 | 35 | Plus |