BS12217.complete Sequence
434 bp assembled on 2006-11-01
GenBank Submission: FJ637100
> BS12217.complete
GAAGTTATCAGTCGACATGGAGCCCATATCACATCTGGTGAAGTCCTCGC
TGCCCAATTACTTGTCAAGTCTGCCGGTTCCCGACAGCATCGGCGGCTGG
TTTAAGCTCTCCTTCAAGGATTGGTTGGCCCTGATCCCACCCACCGTGGT
GGTGGCCGGACTCGGCTACACCGCCTACCTGGCCTACTGTCCGGCGGCAC
GGGCCAGCTGCGCGGCCAAAAACAGCGGACGCTGCAACAACCACATCCGC
AAGAACGAGCCCAAGGTGGTGGACATGATCGACGTGGAGGATATTGCGGA
GAAGGCGGCCTTCTGTCGCTGCTGGAAGACCAAGAACTGGCCCTACTGCG
ATGGCAGTCATGGCGAGCACAACAAGCAGACTGGAGACAACGTCGGACCA
ATTGTCATCAAGAAGTAGAAGCTTTCTAGACCAT
BS12217.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 12:50:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cisd2-RA | 402 | CG1458-PA | 1..402 | 17..418 | 2010 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 12:50:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cisd2-RA | 675 | CG1458-RA | 85..492 | 12..419 | 2025 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 12:50:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 29222546..29222769 | 337..114 | 1120 | 100 | Minus |
| 3R | 32079331 | 3R | 29223243..29223344 | 113..12 | 495 | 99 | Minus |
| 3R | 32079331 | 3R | 29222400..29222481 | 419..338 | 410 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 12:50:30 has no hits.
BS12217.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:46:01 Download gff for
BS12217.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1458-RA | 1..402 | 17..418 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:21:01 Download gff for
BS12217.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1458-RA | 84..491 | 12..419 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:46:26 Download gff for
BS12217.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1458-RA | 90..491 | 17..418 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:46:02 Download gff for
BS12217.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1458-RA | 84..491 | 12..419 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:05:53 Download gff for
BS12217.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cisd2-RA | 90..491 | 17..418 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:05:53 Download gff for
BS12217.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 29222546..29222769 | 114..337 | 100 | <- | Minus |
| 3R | 29223243..29223339 | 17..113 | 100 | | Minus |
| 3R | 29222401..29222481 | 338..418 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:46:26 Download gff for
BS12217.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 25048123..25048203 | 338..418 | 100 | <- | Minus |
| arm_3R | 25048268..25048491 | 114..337 | 100 | <- | Minus |
| arm_3R | 25048965..25049061 | 17..113 | 100 | | Minus |
BS12217.pep Sequence
Translation from 16 to 417
> BS12217.pep
MEPISHLVKSSLPNYLSSLPVPDSIGGWFKLSFKDWLALIPPTVVVAGLG
YTAYLAYCPAARASCAAKNSGRCNNHIRKNEPKVVDMIDVEDIAEKAAFC
RCWKTKNWPYCDGSHGEHNKQTGDNVGPIVIKK*
BS12217.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:36:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cisd2-PA | 133 | CG1458-PA | 1..133 | 1..133 | 733 | 100 | Plus |
