BS12218.complete Sequence
788 bp assembled on 2006-11-01
GenBank Submission: FJ637101
> BS12218.complete
GAAGTTATCAGTCGACATGTTTGCGGCTAAGCGAGTAAGGGCCCGTGCGA
AGAACTTCACCATTGAGGAGGAGGAGATCCTGGAGAACCTGATCCTGGCG
CATCGCGACGTGATCCGCAACAAGCAGAAGGATCCGGCCATTTGGAGGAA
GAAATCGGAGGCGTGGAAGCAAATTGAGGCGGACTTCGCCATTCAGACCG
GAATAGAGCGTTCTTGGCAGGCTCTGCGAGAGAAGTACACCAACAACCTG
CGGATGATGCGAAAGAACGGAACACTGAGTGACGAGGAGGCAAAGACTGA
CAATGCATCAGATTCGGTGCAGAATTTGTCCATTTCGGGAGTTTCTTCGC
TGGCTGCAGCTGCTGATAATGAAGAAAGTAGTACCTATTTCGAATCGGAA
TTGAACCGAAAAAGCCTCAGAAGCGCCTCTACCGAAGTCAAGCTCGTGCC
GAATAACTCAAGCTACTCAGTTGACAGACCAAACTACTCAGCTCTGAATG
TAAATGAAGAGTCAGTCGATGTGAGCTCAGAAGAGGATGCCACGAATACC
CTGAAGGATGAAAAAGTCGTTCTGATCAGGCTGCAACAGGAGTACTATCG
ATGCGAAAACGCCCGGGCAGCCGAGAAGCACAAGCTTGAGATGGAGAAGC
AGAAATACGAGCTGGAGCAGCGAAAGGTGGAGCTGCGCAATATGCGCCTG
AAAAACGAACTTCTCGAAGCGGAAATACTCGAAAAACGACGCAAAGTCGC
GCAAAGCAAGGCTTCATCCTAAAAGCTTTCTAGACCAT
BS12218.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:52:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14352-RA | 756 | CG14352-PA | 1..756 | 17..772 | 3780 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:52:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14352-RA | 1030 | CG14352-RA | 99..854 | 17..772 | 3780 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 06:51:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 1612006..1612400 | 378..772 | 1975 | 100 | Plus |
2L | 23513712 | 2L | 1611508..1611870 | 17..379 | 1815 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 06:51:59 has no hits.
BS12218.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:46:03 Download gff for
BS12218.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14352-RA | 1..756 | 17..772 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:21:03 Download gff for
BS12218.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14352-RA | 88..849 | 17..779 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:56:56 Download gff for
BS12218.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14352-RA | 105..852 | 23..770 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:46:03 Download gff for
BS12218.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14352-RA | 88..849 | 17..779 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:56:31 Download gff for
BS12218.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14352-RA | 105..852 | 23..770 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 07:56:31 Download gff for
BS12218.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 1611514..1611868 | 23..377 | 100 | -> | Plus |
2L | 1612006..1612398 | 378..770 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:56:56 Download gff for
BS12218.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 1611514..1611868 | 23..377 | 100 | -> | Plus |
arm_2L | 1612006..1612398 | 378..770 | 100 | | Plus |
BS12218.pep Sequence
Translation from 16 to 771
> BS12218.pep
MFAAKRVRARAKNFTIEEEEILENLILAHRDVIRNKQKDPAIWRKKSEAW
KQIEADFAIQTGIERSWQALREKYTNNLRMMRKNGTLSDEEAKTDNASDS
VQNLSISGVSSLAAAADNEESSTYFESELNRKSLRSASTEVKLVPNNSSY
SVDRPNYSALNVNEESVDVSSEEDATNTLKDEKVVLIRLQQEYYRCENAR
AAEKHKLEMEKQKYELEQRKVELRNMRLKNELLEAEILEKRRKVAQSKAS
S*
BS12218.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:36:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14352-PA | 251 | CG14352-PA | 1..251 | 1..251 | 1243 | 100 | Plus |