BS12223.complete Sequence
785 bp assembled on 2006-11-01
GenBank Submission: FJ637103
> BS12223.complete
GAAGTTATCAGTCGACATGCGTCTTGTTTTTACGGGTAATTGTGTTTTTA
AACGCCTGCTGCACACGGAAATAGGCGGAAAGTATGCCAAACAGCAGCCG
CGGAACCTCAAAGGACGGAGCAAGAGCTCCCAGGAGTGGCTTACGCGCCA
ACTGGCGGATCCGTACGTGGAGAAGGCCCGCATGATGAACTATCGCTGCC
GGAGTGCCTTCAAATTACTGGAGATCGACGACAAATACGGAATACTGCGG
CCCGGAGACACAGTTTTGGAATGCGGAGCTGCTCCTGGCAGCTGGACCCA
GGTGGCCGTGGAGCGGACCAATGCCAACGGAAAGCAGGAGCGGGCGCCAC
AGGGAGCCGTCTTTAGCATCGACCTGTTGCATTTCCATGCTGTGCCGGGT
GCCACAATCTTTGGCGGCATGGATTTCACTTCTTCGCTGGCACAAAAGCG
GCTGAGGGAAGCGTTACAAGACAGAAAGGTCAACTGCGTGCTGTCCGATA
TGGCACCCAATGCCACCGGAGTGAGGATGCTGGACCAGGAGAGCATCACT
AACCTCTGCTACGAGGTGCTGCGCTTTGCCCTGGCCATGTCTGCTCCGCA
GGCCCATCTGGTGGTCAAGGTGTGGGATAATGGCGACGTGCCCAAGCTGG
AGCGAGATATGCTTAGGTTTTATGAGAAAGTGAAGAGAGTAAAACCGCGC
GCTAGCCGCGGAGACTCCGCCGAGCACTTCCTGGTGGCCAGGAACTTTAA
AGGAGCAACGGATAGTTAAAAGCTTTCTAGACCAT
BS12223.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:21:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11447-RA | 753 | CG11447-PA | 1..753 | 17..769 | 3765 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:21:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11447-RA | 991 | CG11447-RA | 34..786 | 17..769 | 3765 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:21:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 19861643..19862395 | 17..769 | 3765 | 100 | Plus |
Blast to na_te.dros performed 2014-11-26 22:21:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| aurora-element | 4263 | aurora-element DMAURA 4263bp Derived from AB022762 (d1268008) (Rel. 59, Last updated, Version 1). | 3666..3727 | 252..313 | 112 | 64.5 | Plus |
BS12223.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:46:07 Download gff for
BS12223.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11447-RA | 1..753 | 17..769 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:21:06 Download gff for
BS12223.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11447-RA | 25..783 | 9..775 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:55:31 Download gff for
BS12223.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11447-RA | 34..784 | 17..767 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:46:07 Download gff for
BS12223.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11447-RA | 25..783 | 9..775 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:58:47 Download gff for
BS12223.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11447-RA | 34..784 | 17..767 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:58:47 Download gff for
BS12223.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 19861643..19862393 | 17..767 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:55:31 Download gff for
BS12223.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 15687365..15688115 | 17..767 | 100 | | Plus |
BS12223.pep Sequence
Translation from 16 to 768
> BS12223.pep
MRLVFTGNCVFKRLLHTEIGGKYAKQQPRNLKGRSKSSQEWLTRQLADPY
VEKARMMNYRCRSAFKLLEIDDKYGILRPGDTVLECGAAPGSWTQVAVER
TNANGKQERAPQGAVFSIDLLHFHAVPGATIFGGMDFTSSLAQKRLREAL
QDRKVNCVLSDMAPNATGVRMLDQESITNLCYEVLRFALAMSAPQAHLVV
KVWDNGDVPKLERDMLRFYEKVKRVKPRASRGDSAEHFLVARNFKGATDS
*
BS12223.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:36:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11447-PA | 250 | CG11447-PA | 1..250 | 1..250 | 1300 | 100 | Plus |
| CG7009-PA | 320 | CG7009-PA | 10..205 | 48..244 | 201 | 28.4 | Plus |
| CG5220-PA | 302 | CG5220-PA | 10..207 | 48..244 | 200 | 28.8 | Plus |
| CG8939-PA | 817 | CG8939-PA | 13..200 | 48..244 | 200 | 29.9 | Plus |
