BS12236.complete Sequence
1646 bp assembled on 2007-10-17
GenBank Submission: FJ637109
> BS12236.complete
GAAGTTATCAGTCGACATGGGTGGAATTTCGAGGTGTCTCGCCCTTCAGA
TAGTGGTTCTGATTGCCGGAGCCCATGGAGCCAACATTCTGGGTCTGTTC
ACCAGCCTGAGTCCGTCGCACTTGGTCATCCAGATGTCGATGGCCCGGAT
TCTGGCCGAGAGGGGGCACAACGTGACTGTAGTTACGATCCTAAAACCTC
CGTCTCTACACAAGGATATCAACCACATTCTGGTGCCAATGGAAGAGGAT
ATCCTACAGGCATTCAATTCTGTGGTCGGTGGAATGACAAAGACGGACAA
TAGCAATGCATACGTGTCCATGTTTAGATCGGTCAGACAGTTGAGCGAGA
CGTTCTCCAAGATGGGTGATGTGATGAAGCAACCGTTGGTTAAAGATCTC
TACGAGCACCCGGACAACAAGTTCGATTTGGTCATGGTGGGCTACTTTAT
GAACTGTTATCAACTGGCCCTGGCCCACAAACTGAAGGTTCCGCTGGTGG
TGGCCCTTTCGAACCCGCCATCATTTTTGGGATACCTTTTGGGCAACCCC
TGGGAAGTCTCATATGTGCCGGGCATGAGTGTGTCCATTAAAGGTGGCAA
GCCACTGGGCTTTGGACACCGTGTGCTCAACCTGCTGGGAAGCATGGCAC
AGCGGCTGTTCATGTTCATAATTGAGCTTAGGAATGCCAGGATCTACAGG
GAGATCTATGGCGACGATCCCACTCTGCCCAGCTATGAGGACTTGCACAA
AAATATATCGCTAATCTTCTTTGCCTCGCATGGGATTAGCGAAGGACCCA
TCCGTCCCAATGTGCCAGCTGTAATTGAGATCGGAGGAATACAAGTCAAG
GAGCAACCCGAAAGGCTGCCACAAAACATGGAACAGTTCCTGAGCGAAGC
GCCAAACGGAGCTATTCTACTCAGCCTGGGATCCAACCTAAAGGAGGACC
ATTTGAAGTCCAGCACGGTGCAGAAAATGTTTAATGTGCTCTCTAAGCTG
CAGCAGAAGGTGATTTGGAAGTGGGACGACCTGGATAATATACCGGGAGA
GTCCGAAAACATACTCTACTCCAAATGGGTGCCCCAGGTCGACGTCCTGG
CACATCCGAACATAACGCTGTTCATCACCCATGCGGGAAAGGGCGGCTTG
ACGGAGGCCCAGTATCATGGCAAACCCATGCTGGCCCTACCAGTTTTCGG
TGACCAGCCCTCCAATGCCGATGTCATGGTGATGCATGGCTTTGGAATCA
AGCAAAGCATCCTTACCCTGGAGGAGGACAGCTTCCTGCAGGGAATTCGA
GAGGTACTCGATAATCCGAAGTATGCCACTGCCGTCAAGTCGTTCTCAAC
TCTCTATCGGGATCGTCCTCTAAGTCCTCGTGAGACCCTGATCTACTGGG
TGGAGTATGTGATTCGATACCACGGAGCTCCGCACATCCAGAGTCCTGTG
GTGCACATGAGCTACATAGCAGCCAATAACCTGGACGTATATGCTGTGAT
CCTCGGAACGATTGTTGCTCTCTGCTTTATTACTAAATTACTGTTTGGTT
TAGTTGTTGGAAAACTTAGGAAAAATTCTAGAAAGGCAAAAGTTAATCAG
AAGCATAAGCTCAAGAAGAAACAGAGCTAGAAGCTTTCTAGACCAT
BS12236.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 19:41:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ugt37b1-RA | 1614 | CG9481-PA | 1..1614 | 17..1630 | 8070 | 100 | Plus |
| Ugt37a1-RA | 1443 | CG11012-PA | 631..1075 | 788..1232 | 320 | 71.5 | Plus |
| Ugt36Bc-RC | 1632 | CG17932-PC | 1016..1236 | 1002..1222 | 280 | 75.1 | Plus |
| Ugt37a1-RA | 1443 | CG11012-PA | 1232..1344 | 1389..1501 | 205 | 78.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 19:41:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ugt37b1-RA | 1740 | CG9481-RA | 32..1645 | 17..1630 | 8070 | 100 | Plus |
| Ugt37a1-RA | 1623 | CG11012-RA | 747..1191 | 788..1232 | 320 | 71.5 | Plus |
| Ugt36Bc-RC | 1738 | CG17932-RC | 1056..1276 | 1002..1222 | 280 | 75.1 | Plus |
| Ugt37a1-RA | 1623 | CG11012-RA | 1348..1460 | 1389..1501 | 205 | 78.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 19:41:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 6225814..6226747 | 697..1630 | 4670 | 100 | Plus |
| 2L | 23513712 | 2L | 6225079..6225762 | 17..700 | 3420 | 100 | Plus |
| 2L | 23513712 | 2L | 20372841..20373285 | 1232..788 | 320 | 71.5 | Minus |
| 2L | 23513712 | 2L | 16800902..16801122 | 1002..1222 | 280 | 75.1 | Plus |
| 3R | 32079331 | 3R | 12740693..12740950 | 973..1230 | 255 | 73.3 | Plus |
| 3R | 32079331 | 3R | 12742419..12742619 | 1209..1009 | 255 | 75.1 | Minus |
| 2L | 23513712 | 2L | 16797638..16797822 | 986..1170 | 235 | 75.1 | Plus |
| 3R | 32079331 | 3R | 12741109..12741215 | 1389..1495 | 220 | 80.4 | Plus |
| 3R | 32079331 | 3R | 12743507..12743612 | 177..72 | 215 | 80.2 | Minus |
| 2L | 23513712 | 2L | 20372572..20372684 | 1501..1389 | 205 | 78.8 | Minus |
| 3R | 32079331 | 3R | 12742149..12742236 | 1479..1392 | 200 | 81.8 | Minus |
| 3R | 32079331 | 3R | 12739725..12739828 | 74..177 | 190 | 78.8 | Plus |
Blast to na_te.dros performed on 2014-11-27 19:41:52 has no hits.
BS12236.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:14:44 Download gff for
BS12236.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ugt37b1-RA | 1..1614 | 17..1630 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:45:38 Download gff for
BS12236.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ugt37b1-RA | 25..1645 | 11..1636 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:58:12 Download gff for
BS12236.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ugt37b1-RA | 32..1645 | 17..1630 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 16:50:41 Download gff for
BS12236.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ugt37b1-RA | 30..1643 | 17..1630 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:06:35 Download gff for
BS12236.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ugt37b1-RA | 32..1645 | 17..1630 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:06:35 Download gff for
BS12236.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 6225079..6225761 | 17..699 | 100 | -> | Plus |
| 2L | 6225817..6226747 | 700..1630 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:58:12 Download gff for
BS12236.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 6225079..6225761 | 17..699 | 100 | -> | Plus |
| arm_2L | 6225817..6226747 | 700..1630 | 100 | | Plus |
BS12236.pep Sequence
Translation from 16 to 1629
> BS12236.pep
MGGISRCLALQIVVLIAGAHGANILGLFTSLSPSHLVIQMSMARILAERG
HNVTVVTILKPPSLHKDINHILVPMEEDILQAFNSVVGGMTKTDNSNAYV
SMFRSVRQLSETFSKMGDVMKQPLVKDLYEHPDNKFDLVMVGYFMNCYQL
ALAHKLKVPLVVALSNPPSFLGYLLGNPWEVSYVPGMSVSIKGGKPLGFG
HRVLNLLGSMAQRLFMFIIELRNARIYREIYGDDPTLPSYEDLHKNISLI
FFASHGISEGPIRPNVPAVIEIGGIQVKEQPERLPQNMEQFLSEAPNGAI
LLSLGSNLKEDHLKSSTVQKMFNVLSKLQQKVIWKWDDLDNIPGESENIL
YSKWVPQVDVLAHPNITLFITHAGKGGLTEAQYHGKPMLALPVFGDQPSN
ADVMVMHGFGIKQSILTLEEDSFLQGIREVLDNPKYATAVKSFSTLYRDR
PLSPRETLIYWVEYVIRYHGAPHIQSPVVHMSYIAANNLDVYAVILGTIV
ALCFITKLLFGLVVGKLRKNSRKAKVNQKHKLKKKQS*
BS12236.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:32:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ugt37b1-PA | 537 | CG9481-PA | 1..537 | 1..537 | 2771 | 100 | Plus |
| CG5724-PA | 530 | CG5724-PA | 6..528 | 3..525 | 1618 | 58.8 | Plus |
| CG5999-PB | 530 | CG5999-PB | 11..530 | 8..527 | 1470 | 53.7 | Plus |
| Ugt37a1-PA | 480 | CG11012-PA | 1..478 | 40..525 | 1373 | 53 | Plus |
| Ugt36Bc-PC | 543 | CG17932-PC | 13..543 | 1..535 | 1317 | 48 | Plus |
