BS12244.complete Sequence
488 bp assembled on 2006-11-01
GenBank Submission: FJ637113
> BS12244.complete
GAAGTTATCAGTCGACATGACGGGTCGCGAATCCAACCGCATCAAGGACG
CTGAAAAGAAGCGTGTCCTGGACTCCACAGCCCGCCAGCGGCGTGCCCGC
AAAGCCTTGGAGGCTCTGGAGCAGGACAACTACCACGATGACCCACACGC
CGACCTTGTCATGTCCAAGAAGTTGCCCAAATTCCAGGACAGCCTGAAGA
CCGGCAAGGAGAAGAAAGGCAAGCGCAAGGGCGCCGAATACTTTCTCGTC
AAGTATCGCAAGAACTTCCAGCAACTGCTCGAGGAGGACAAGGACAAGCA
GCCCAACTACGAGAGCGCCGCAGCGCCGGCTCCACAAAAGCCACTGCGGC
ATTTCTGCGCCGTTTGCGGCAACTTCTCGTTGTACTCGTGCACCGCCTGC
GGAACGCGATACTGTTGCGTTAGATGCCTGCAAACGCACCAGGACACGCG
CTGCCTCAAGTGGACGGCCTGAAAGCTTTCTAGACCAT
BS12244.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:44:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31917-RA | 456 | CG31917-PA | 1..456 | 17..472 | 2280 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:44:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31917-RA | 846 | CG31917-RA | 344..800 | 16..472 | 2285 | 100 | Plus |
| Tfb5-RB | 846 | CG42373-RB | 344..800 | 16..472 | 2285 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:44:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 5009977..5010433 | 472..16 | 2285 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 14:44:27 has no hits.
BS12244.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:45:46 Download gff for
BS12244.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31917-RA | 1..456 | 17..472 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:20:40 Download gff for
BS12244.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42373-RA | 331..793 | 9..476 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:50:42 Download gff for
BS12244.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31917-RA | 345..799 | 17..471 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:45:46 Download gff for
BS12244.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31917-RA | 331..793 | 9..476 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:17:40 Download gff for
BS12244.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tfb5-RB | 345..799 | 17..471 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:17:40 Download gff for
BS12244.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 5009978..5010432 | 17..471 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:50:42 Download gff for
BS12244.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 5009978..5010432 | 17..471 | 100 | | Minus |
BS12244.pep Sequence
Translation from 16 to 471
> BS12244.pep
MTGRESNRIKDAEKKRVLDSTARQRRARKALEALEQDNYHDDPHADLVMS
KKLPKFQDSLKTGKEKKGKRKGAEYFLVKYRKNFQQLLEEDKDKQPNYES
AAAPAPQKPLRHFCAVCGNFSLYSCTACGTRYCCVRCLQTHQDTRCLKWT
A*
BS12244.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:37:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31917-PA | 151 | CG31917-PA | 1..151 | 1..151 | 815 | 100 | Plus |
