BS12245.complete Sequence
1124 bp assembled on 2006-11-01
GenBank Submission: FJ637114
> BS12245.complete
GAAGTTATCAGTCGACATGGAGCTGAATATCTTTGACGACTGCTGGGAGC
TGGTGCAACGATTTCAGCGATTGGTTAATGATGGCGAAAACTGCGAGTTC
GAGGTGTTCTGCCGGTGCTGGCGAGAACTGCAGCTGCAGCACCTCTTCAC
TGCCCAGACGAACCACACAGAGGTGATAGCCACCACACTGGCGGCCCTGC
ATGTGGCCAAGCGACTGTCGTGCTCCCGACGCACCACCGGGGACGTTTTC
CCGGCATCTCGCGCTCAAAGGATCGGAGGTTTCTTTCTGCTCTACGTAAT
CTACTACAAGCAGCCCACGCACAACTTTATTAAGATCGAGGTCTCACCGC
GCACTTGGCAAGAACTAACAGACTACGCTCTAGATCTGCGCAAGGATAGT
CCGGAGCGGAAGGACACTCATCAGATCGCCTACATGCTGTGGCGCCTGAC
CCAGGAGCAGGCCTTCCGCTTCACCGCGCTCGACTATTGCCAGGGGTTGG
ACAATCTGGTGGACTACGACCGTGTGGAGACCGTAGCGGGTGCCAAGGAA
CAGAGGCAGAGTGCCTTGATGCAGAAGCAACAGCGTGCGAACGGCGTCAG
TCTCACATACGAACTGGAGGGTCTGCGAGCACTGGACCAGGCAAGCCAGC
CATTGTGTGAACTGGAAGCGGCATACAATGCCCAAAAGAAGCAATTGGCG
GCTGGTCATGAGCACGCTTTGCCGCCCTCTCAAATATTCGGCCATTTGCG
AGAAGTCTTTGCCGATATCCAAAGTGTTCTAGGAGCTAGAAAGAGTACTC
CAGATGAGAATTGTACCACAACATCTACAGGCAACCAGTTGGAAGTGCGC
CAGAGGGTGCGGAACAAGGCCATGTACGGCGTCGAGGAACGGGAGCCGCA
AAACCAGGCGGATGAACTAGAAGTGCAGCTGGAGGTCAACGAGACTTATC
AACGCCGCATGTCCTCGGCCACCGTTTTTCAGAGGGAACTTCCAGCAGAC
GTGCAGCAAGAGTATGAGATGATTGAGTTTAGTGACGACGAGGAAATGGA
AGTGGGTGAAAGCGAGGAGGTCACGGAAGAAGAACTCAAAGCTATTTTGG
ATACTTGAAAGCTTTCTAGACCAT
BS12245.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 17:03:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Pbp45-RA | 1092 | CG9597-PA | 1..1092 | 17..1108 | 5460 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:03:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Pbp45-RA | 1370 | CG9597-RA | 104..1195 | 17..1108 | 5460 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 17:03:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 15838321..15839412 | 1108..17 | 5460 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 17:03:53 has no hits.
BS12245.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:45:47 Download gff for
BS12245.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Pbp45-RA | 1..1092 | 17..1108 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:20:42 Download gff for
BS12245.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Pbp45-RA | 48..1154 | 5..1114 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:02:53 Download gff for
BS12245.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Pbp45-RA | 104..1194 | 17..1107 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:45:47 Download gff for
BS12245.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Pbp45-RA | 48..1154 | 5..1114 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:33:45 Download gff for
BS12245.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Pbp45-RA | 104..1194 | 17..1107 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:33:45 Download gff for
BS12245.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 15838322..15839412 | 17..1107 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:02:53 Download gff for
BS12245.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 11664044..11665134 | 17..1107 | 100 | | Minus |
BS12245.pep Sequence
Translation from 16 to 1107
> BS12245.pep
MELNIFDDCWELVQRFQRLVNDGENCEFEVFCRCWRELQLQHLFTAQTNH
TEVIATTLAALHVAKRLSCSRRTTGDVFPASRAQRIGGFFLLYVIYYKQP
THNFIKIEVSPRTWQELTDYALDLRKDSPERKDTHQIAYMLWRLTQEQAF
RFTALDYCQGLDNLVDYDRVETVAGAKEQRQSALMQKQQRANGVSLTYEL
EGLRALDQASQPLCELEAAYNAQKKQLAAGHEHALPPSQIFGHLREVFAD
IQSVLGARKSTPDENCTTTSTGNQLEVRQRVRNKAMYGVEEREPQNQADE
LEVQLEVNETYQRRMSSATVFQRELPADVQQEYEMIEFSDDEEMEVGESE
EVTEEELKAILDT*
BS12245.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:36:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Pbp45-PA | 363 | CG9597-PA | 1..363 | 1..363 | 1885 | 100 | Plus |