BS12257.complete Sequence
761 bp assembled on 2006-11-01
GenBank Submission: FJ637118
> BS12257.complete
GAAGTTATCAGTCGACATGAAGCCCCAGAGCAAGCGGAAATCATTCCCAT
TCAATGCGCCTCCTCCGGGCGGTATCATGGACTTCGGATTCGGGAGCTGC
AGCACCTTCGGCAATTCGGTGGAGAATGATCTGGTAAAATGGCAGCATAA
GCGAAAATCCGAGCAGCCGGCACCGGCAGTGCTACCACCCAAAATGCTTA
TAACCGAGGAGAGGATCACCCAGCATTTCAGCGGTCTATCGCTGGATCCG
AAGATCAATGTCGCCGCCACGGCCGTTGTTAGCAACAACAACAGCGTGGC
CAGCGTTACGGGCGGACTGGCCACGGATGATATACCATCCACCAGCACCG
GGAAGACCCACCACCCCAATCCCGCCTATCAAATGGCGGCCATGGAACTG
GAGCAGAAACTGCGCAATGCCAATCGCATCGTAATTTGTGATGGCCTTAA
GCCAGGATCGGGTCCCGGTTCCGCTCCACCTGTAATACCACCGGAGTGGC
TAATCAAGTCCATACCACGTCCCTGCACCGCCTTGGTCCCTTGGCAGCCT
TCGCCACTGCAGATGCCGATGCCGATGCCGGAAGTCAAGATGGTGTCGCC
CCAAATAGTGGCACCCATGGCTGCGGCACCGGCGGTCCAGGAGCTGGATG
ACTACGATGACGATCTGGAGTTCTTCGAGAACAACAACACGTGCAGCGTG
AATCTTAACAAGTCTGAGCAGGAGCACATGGACGAAGACCTGTAGAAGCT
TTCTAGACCAT
BS12257.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:40:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Mst85C-RB | 729 | CG11993-PB | 1..729 | 17..745 | 3645 | 100 | Plus |
Mst85C-RA | 729 | CG11993-PA | 1..729 | 17..745 | 3645 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:40:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Mst85C-RB | 1330 | CG11993-RB | 119..847 | 17..745 | 3645 | 100 | Plus |
Mst85C-RA | 1352 | CG11993-RA | 141..869 | 17..745 | 3645 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:40:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 9051187..9051748 | 184..745 | 2810 | 100 | Plus |
3R | 32079331 | 3R | 9050961..9051127 | 17..183 | 835 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 07:40:22 has no hits.
BS12257.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:47:26 Download gff for
BS12257.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Mst85C-RA | 1..729 | 17..745 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:35:22 Download gff for
BS12257.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Mst85C-RA | 136..866 | 13..745 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:20:09 Download gff for
BS12257.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Mst85C-RA | 141..869 | 17..745 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:47:26 Download gff for
BS12257.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Mst85C-RA | 136..866 | 13..745 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:14:58 Download gff for
BS12257.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Mst85C-RA | 141..869 | 17..745 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:14:58 Download gff for
BS12257.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 9050961..9051127 | 17..183 | 100 | -> | Plus |
3R | 9051187..9051748 | 184..745 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:20:09 Download gff for
BS12257.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 4876683..4876849 | 17..183 | 100 | -> | Plus |
arm_3R | 4876909..4877470 | 184..745 | 100 | | Plus |
BS12257.pep Sequence
Translation from 16 to 744
> BS12257.pep
MKPQSKRKSFPFNAPPPGGIMDFGFGSCSTFGNSVENDLVKWQHKRKSEQ
PAPAVLPPKMLITEERITQHFSGLSLDPKINVAATAVVSNNNSVASVTGG
LATDDIPSTSTGKTHHPNPAYQMAAMELEQKLRNANRIVICDGLKPGSGP
GSAPPVIPPEWLIKSIPRPCTALVPWQPSPLQMPMPMPEVKMVSPQIVAP
MAAAPAVQELDDYDDDLEFFENNNTCSVNLNKSEQEHMDEDL*
BS12257.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:26:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Mst85C-PB | 242 | CG11993-PB | 1..242 | 1..242 | 1290 | 100 | Plus |
Mst85C-PA | 242 | CG11993-PA | 1..242 | 1..242 | 1290 | 100 | Plus |