BS12264.complete Sequence
473 bp assembled on 2006-11-01
GenBank Submission: FJ637120
> BS12264.complete
GAAGTTATCAGTCGACATGATTGACCAGCACAAGCGCAGCCACAAATCAG
AGAAATCCAGTCGCAAGTCGGGAAAGAAACATTCCGACAAACCACACAAG
GTGAAGACCCACGATCCGCTCAAGAAACAAAAGAAGCGGGCTCTAAAGAA
GCTCCGCCGCAAGTCCGCCACCGTGAATTTCCCGTACCAACTCTTCTTGT
ACCGCCAAGAACTAAGGCGGGCCAGCGCCGACTTTTCCTATCTCCGGCTG
TCCAAGGCCAAGATAGTGCTTACCTCCCAACTAATCGCCAAGAAGATGGG
CAGCTGCAATCCCGATTGCAGCGTGGACGAGCTTAAGGAACTCAGCCGCG
AGGTGCAGTTCCAGAAACGCCTCTGCCATCAAGTGGAGCGCCTGCAGCAA
TTCCGGCAACTGGGACTCACCGAGATGATCCTCAACGGCAAGAAGACGAC
GCTGTAAAAGCTTTCTAGACCAT
BS12264.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 20:13:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| SNCF-RA | 441 | CG14112-PA | 1..441 | 17..457 | 2205 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 20:13:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| SNCF-RA | 608 | CG14112-RA | 39..480 | 16..457 | 2210 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 20:13:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 13378621..13379062 | 16..457 | 2210 | 100 | Plus |
Blast to na_te.dros performed 2014-11-27 20:13:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Transpac | 5249 | Transpac 5249bp Derived from AF222049 (AF222049.1) (Rel. 62, Last updated, Version 1). | 2765..2820 | 43..98 | 109 | 66.1 | Plus |
BS12264.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:45:50 Download gff for
BS12264.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| SNCF-RA | 1..441 | 17..457 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:20:47 Download gff for
BS12264.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| SNCF-RA | 32..481 | 9..462 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:05:01 Download gff for
BS12264.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| SNCF-RA | 40..478 | 17..455 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:45:51 Download gff for
BS12264.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| SNCF-RA | 32..481 | 9..462 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:17:26 Download gff for
BS12264.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| SNCF-RA | 40..478 | 17..455 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:17:26 Download gff for
BS12264.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 13378622..13379060 | 17..455 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:05:01 Download gff for
BS12264.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 13371722..13372160 | 17..455 | 100 | | Plus |
BS12264.pep Sequence
Translation from 16 to 456
> BS12264.pep
MIDQHKRSHKSEKSSRKSGKKHSDKPHKVKTHDPLKKQKKRALKKLRRKS
ATVNFPYQLFLYRQELRRASADFSYLRLSKAKIVLTSQLIAKKMGSCNPD
CSVDELKELSREVQFQKRLCHQVERLQQFRQLGLTEMILNGKKTTL*
BS12264.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:36:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| SNCF-PA | 146 | CG14112-PA | 1..146 | 1..146 | 744 | 100 | Plus |
| CG13711-PA | 127 | CG13711-PA | 31..115 | 47..134 | 150 | 37.5 | Plus |
