BS12266.complete Sequence
425 bp assembled on 2006-11-01
GenBank Submission: FJ638843
> BS12266.complete
GAAGTTATCAGTCGACATGGTGCGTATGAACGTATTGGCCGATGCCTTGA
AGTGCATAAACAACGCCGAGAAGCGTGGCAAGCGGCAGGTGCTGCTGCGT
CCCTGCTCCAAGGTGATCATCAAGTTCCTGACCGTGATGATGAAGCATGG
CTATATCGGCGAATTCGAGATCGTCGACGATCATCGTTCCGGCAAGATCG
TTGTCAACCTGACCGGTAGGCTAAACAAGTGCGGCGTCATCTCGCCCCGC
TTCGATGTGCCCATCAACGACATCGAGAAATGGACCAACAATCTGTTGCC
CTCGCGTCAGTTTGGTTACGTTGTGCTCACCACCTCTGGCGGCATCATGG
ACCACGAGGAGGCTAGGAGAAAACATTTGGGAGGCAAAATTCTCGGCTTC
TTCTTCTAGAAGCTTTCTAGACCAT
BS12266.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 15:02:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
RpS15Aa-RF | 393 | CG2033-PF | 1..393 | 17..409 | 1965 | 100 | Plus |
RpS15Aa-RE | 393 | CG2033-PE | 1..393 | 17..409 | 1965 | 100 | Plus |
RpS15Aa-RD | 393 | CG2033-PD | 1..393 | 17..409 | 1965 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:02:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
RpS15Aa-RF | 674 | CG2033-RF | 69..463 | 16..410 | 1975 | 100 | Plus |
RpS15Aa-RE | 741 | CG2033-RE | 136..530 | 16..410 | 1975 | 100 | Plus |
RpS15Aa-RD | 877 | CG2033-RD | 136..530 | 16..410 | 1975 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 15:02:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 13335984..13336378 | 410..16 | 1975 | 100 | Minus |
2R | 25286936 | 2R | 10821813..10822206 | 17..410 | 1865 | 98.2 | Plus |
2L | 23513712 | 2L | 14747017..14747075 | 410..352 | 265 | 96.6 | Minus |
Blast to na_te.dros performed on 2014-11-27 15:02:11 has no hits.
BS12266.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:45:37 Download gff for
BS12266.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
RpS15Aa-RD | 1..393 | 17..409 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:20:29 Download gff for
BS12266.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
RpS15Aa-RC | 77..475 | 9..410 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:36:21 Download gff for
BS12266.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
RpS15Aa-RD | 137..529 | 17..409 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:45:37 Download gff for
BS12266.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
RpS15Aa-RC | 77..475 | 9..410 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:58:25 Download gff for
BS12266.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
RpS15Aa-RD | 137..529 | 17..409 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:58:25 Download gff for
BS12266.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 13335985..13336377 | 17..409 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:36:21 Download gff for
BS12266.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 13230018..13230410 | 17..409 | 100 | | Minus |
BS12266.pep Sequence
Translation from 16 to 408
> BS12266.pep
MVRMNVLADALKCINNAEKRGKRQVLLRPCSKVIIKFLTVMMKHGYIGEF
EIVDDHRSGKIVVNLTGRLNKCGVISPRFDVPINDIEKWTNNLLPSRQFG
YVVLTTSGGIMDHEEARRKHLGGKILGFFF*
BS12266.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:37:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
RpS15Aa-PF | 130 | CG2033-PF | 1..130 | 1..130 | 681 | 100 | Plus |
RpS15Aa-PE | 130 | CG2033-PE | 1..130 | 1..130 | 681 | 100 | Plus |
RpS15Aa-PD | 130 | CG2033-PD | 1..130 | 1..130 | 681 | 100 | Plus |
RpS15Aa-PA | 130 | CG2033-PA | 1..130 | 1..130 | 681 | 100 | Plus |
RpS15Aa-PC | 130 | CG2033-PC | 1..130 | 1..130 | 681 | 100 | Plus |