BS12276.complete Sequence
479 bp assembled on 2006-11-01
GenBank Submission: FJ637129
> BS12276.complete
GAAGTTATCAGTCGACATGCCCAAGAATAAAGGAAAAGGAGGCAAGAATC
GTCGTCGTGGTAAGAACGAGAACGAGTTCGAGAAGCGTGAGCTGATCTTC
AAGGAGGACCAACAGGAGTACGCGCAGGTGACCAAGATGCTGGGCAACGG
TCGTCTGGAGGCAATGTGCTTTGATGGCGTCAAACGCCTGTGTCACATTC
GGGGGAAACTTCGCAAGAAGGTGTGGATTAACCAGGGCGACATCATATTG
GTGGGCTTGCGTGACTACCAGGACTCGAAGGCTGATGTGATCCTCAAATA
CACACCGGACGAGGCCAGGAACCTGAAGACGTACGGCGAGTTCCCCGAGT
CGGTGCGCATCAACGAGACAGTCACATTCGTGGAGGATGGCTTCGACGAG
GACATCGAGTTCGGCGATGAGATCAGCTCCGAGGATGACGCCGACTCCGT
GGACAACATCTGAAAGCTTTCTAGACCAT
BS12276.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 23:34:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
eIF-1A-RC | 447 | CG8053-PC | 1..447 | 17..463 | 2235 | 100 | Plus |
eIF-1A-RB | 447 | CG8053-PB | 1..447 | 17..463 | 2235 | 100 | Plus |
eIF-1A-RA | 447 | CG8053-PA | 1..447 | 17..463 | 2235 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 23:34:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
eIF-1A-RC | 1646 | CG8053-RC | 131..577 | 17..463 | 2235 | 100 | Plus |
eIF-1A-RB | 1199 | CG8053-RB | 205..651 | 17..463 | 2235 | 100 | Plus |
eIF-1A-RA | 1158 | CG8053-RA | 164..610 | 17..463 | 2235 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 23:34:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 18281692..18281936 | 219..463 | 1225 | 100 | Plus |
3R | 32079331 | 3R | 18274938..18275144 | 17..223 | 1035 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 23:34:39 has no hits.
BS12276.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:45:27 Download gff for
BS12276.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
eIF-1A-RB | 1..447 | 17..463 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:20:17 Download gff for
BS12276.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
eIF-1A-RB | 197..651 | 9..463 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:32:22 Download gff for
BS12276.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
eIF-1A-RA | 164..609 | 17..462 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:45:27 Download gff for
BS12276.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
eIF-1A-RB | 197..651 | 9..463 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:03:42 Download gff for
BS12276.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
eIF-1A-RA | 164..609 | 17..462 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:03:42 Download gff for
BS12276.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 18274938..18275141 | 17..220 | 100 | -> | Plus |
3R | 18281694..18281935 | 221..462 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:32:22 Download gff for
BS12276.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 14100660..14100863 | 17..220 | 100 | -> | Plus |
arm_3R | 14107416..14107657 | 221..462 | 100 | | Plus |
BS12276.pep Sequence
Translation from 16 to 462
> BS12276.pep
MPKNKGKGGKNRRRGKNENEFEKRELIFKEDQQEYAQVTKMLGNGRLEAM
CFDGVKRLCHIRGKLRKKVWINQGDIILVGLRDYQDSKADVILKYTPDEA
RNLKTYGEFPESVRINETVTFVEDGFDEDIEFGDEISSEDDADSVDNI*
BS12276.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:37:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
eIF-1A-PC | 148 | CG8053-PC | 1..148 | 1..148 | 777 | 100 | Plus |
eIF-1A-PB | 148 | CG8053-PB | 1..148 | 1..148 | 777 | 100 | Plus |
eIF-1A-PA | 148 | CG8053-PA | 1..148 | 1..148 | 777 | 100 | Plus |