BS12315.complete Sequence
536 bp assembled on 2006-11-01
GenBank Submission: FJ637139
> BS12315.complete
GAAGTTATCAGTCGACATGTTGGCTCCCCTGGGCTTCAGCTGTCCGCGAT
GCTTGCTCCTGCGACGTGGCGCCGAGCGTTGGGCCTCACTGGCCCGCCAA
TTGTCGGGCAGCAGCTCCCAGGATGATGCCAGCAGCAAGGATGCGGCCGC
CCAGGAGGCAGCAAGTGGCTGTCCGCCCAATAGCACAACGACGGGCACTG
ACACTCCCAAAGCCAAAGATAAAACCACCAAGGGAAGGAAGCGGCTCAGA
AACATAGAGATACCTCCCGAGCCCACCACCTGCTGCATGTCGGGCTGCGC
CAACTGCGTTTGGCTGGACTACGCACAGACGCTGGCCAAGCTGCTGGGCG
ACAACGATGAGGAGGCGCGAGAGATTGTGCTGAGCAAGATCACCGACCCG
AACCTGAAGATGTTCCTCAGCCTGGAGCTGCGCCAGATGGCTAAGCAGCG
GGAGGAGAAGGCGGCGGCGGAGAAAGCAGCGAAGCAGGGAAAGCCAAAGA
AATCCTCGCCCCCGCCGTAGAAGCTTTCTAGACCAT
BS12315.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:45:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5500-RA | 504 | CG5500-PA | 1..504 | 17..520 | 2520 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:45:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5500-RA | 859 | CG5500-RA | 242..745 | 17..520 | 2520 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:45:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 26880083..26880345 | 258..520 | 1315 | 100 | Plus |
| 3R | 32079331 | 3R | 26879594..26879836 | 17..259 | 1215 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:45:16 has no hits.
BS12315.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:45:21 Download gff for
BS12315.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5500-RA | 1..504 | 17..520 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:20:09 Download gff for
BS12315.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5500-RA | 228..742 | 7..520 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:43:40 Download gff for
BS12315.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5500-RA | 247..745 | 22..520 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:45:21 Download gff for
BS12315.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5500-RA | 228..742 | 7..520 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:02:57 Download gff for
BS12315.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5500-RA | 247..745 | 22..520 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:02:57 Download gff for
BS12315.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 26879599..26879836 | 22..259 | 100 | -> | Plus |
| 3R | 26880085..26880345 | 260..520 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:43:40 Download gff for
BS12315.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 22705321..22705558 | 22..259 | 100 | -> | Plus |
| arm_3R | 22705807..22706067 | 260..520 | 100 | | Plus |
BS12315.pep Sequence
Translation from 16 to 519
> BS12315.pep
MLAPLGFSCPRCLLLRRGAERWASLARQLSGSSSQDDASSKDAAAQEAAS
GCPPNSTTTGTDTPKAKDKTTKGRKRLRNIEIPPEPTTCCMSGCANCVWL
DYAQTLAKLLGDNDEEAREIVLSKITDPNLKMFLSLELRQMAKQREEKAA
AEKAAKQGKPKKSSPPP*
BS12315.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:37:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5500-PA | 167 | CG5500-PA | 1..167 | 1..167 | 869 | 100 | Plus |
