BS12316.complete Sequence
542 bp assembled on 2006-11-01
GenBank Submission: FJ637140
> BS12316.complete
GAAGTTATCAGTCGACATGGCGGTGGGCAGTTCAATTATGGAGACCGTCG
CTATTTTGGCCCTGCTGCTTGGCCTGTTCATTCGAAGTGGCTACTGCATA
GACTGTTTCAAATGCGTGTCATACAATGGTGCTAACAAGGCCTGCGACGA
TCCCTTTCACAACAACTACTCAACGGCCATTTTGGAGTCGCCCTGCATGG
GCGGCCGGAAGGGGCGTGACGGCCTGTTTCCGGCCACCGCTTGCATCAAG
ATCGCCGGCTATTACGATGGAACTGGCGAGACGATAACGGTGAGAGGTTG
CGCCCTGGACAGCGGCACCCTGACCACCGACACAGAGATTATAAGAATGT
CGCATTGCGGAAAGTTCTACTACGATGACAAGTACGTGCACGGGTGCTTG
CAGAGCTGCAGCGATGCGGATGCCTGCAACTCGGCCAGGAGGCAGGGCGC
AAGTCCCGCAGACCTGGAGTCACTGATGAGGCACCTGCTCAGTCTGGTCG
TGTTCCTATTGGCTGCCAGCAGGTAGAAGCTTTCTAGACCAT
BS12316.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:55:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31323-RB | 510 | CG31323-PB | 1..510 | 17..526 | 2550 | 100 | Plus |
CG31323-RA | 510 | CG31323-PA | 1..510 | 17..526 | 2550 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:55:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31323-RB | 1033 | CG31323-RB | 162..671 | 17..526 | 2550 | 100 | Plus |
CG31323-RA | 3489 | CG31323-RA | 285..794 | 17..526 | 2550 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:55:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 26184044..26184221 | 89..266 | 890 | 100 | Plus |
3R | 32079331 | 3R | 26184468..26184612 | 382..526 | 725 | 100 | Plus |
3R | 32079331 | 3R | 26184289..26184407 | 266..384 | 595 | 100 | Plus |
3R | 32079331 | 3R | 26183892..26183965 | 17..90 | 370 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:55:39 has no hits.
BS12316.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:45:22 Download gff for
BS12316.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31323-RA | 1..510 | 17..526 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:20:11 Download gff for
BS12316.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31323-RA | 277..792 | 9..526 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:13:21 Download gff for
BS12316.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31323-RA | 285..794 | 17..526 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:45:22 Download gff for
BS12316.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31323-RA | 277..792 | 9..526 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:30:48 Download gff for
BS12316.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31323-RA | 285..794 | 17..526 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:30:48 Download gff for
BS12316.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 26184045..26184221 | 90..266 | 100 | -> | Plus |
3R | 26184290..26184404 | 267..381 | 100 | -> | Plus |
3R | 26184468..26184612 | 382..526 | 100 | | Plus |
3R | 26183892..26183964 | 17..89 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:13:21 Download gff for
BS12316.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 22009767..22009943 | 90..266 | 100 | -> | Plus |
arm_3R | 22010012..22010126 | 267..381 | 100 | -> | Plus |
arm_3R | 22010190..22010334 | 382..526 | 100 | | Plus |
arm_3R | 22009614..22009686 | 17..89 | 100 | -> | Plus |
BS12316.pep Sequence
Translation from 16 to 525
> BS12316.pep
MAVGSSIMETVAILALLLGLFIRSGYCIDCFKCVSYNGANKACDDPFHNN
YSTAILESPCMGGRKGRDGLFPATACIKIAGYYDGTGETITVRGCALDSG
TLTTDTEIIRMSHCGKFYYDDKYVHGCLQSCSDADACNSARRQGASPADL
ESLMRHLLSLVVFLLAASR*
BS12316.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:37:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31323-PB | 169 | CG31323-PB | 1..169 | 1..169 | 898 | 100 | Plus |
CG31323-PA | 169 | CG31323-PA | 1..169 | 1..169 | 898 | 100 | Plus |