BS12324.complete Sequence
941 bp assembled on 2006-11-01
GenBank Submission: FJ637142
> BS12324.complete
GAAGTTATCAGTCGACATGGGTACAAAGCGTCGCAACATCGAGGATGAGC
TCTCACGCTTCGAGGCGGAGATCTCGAAGCCCCCCGCCCGCAATCTCTTC
GTGCCCAACCAGGTGCGCCCGATCATAGCCGCCAATACGTACCAAAACTC
GCAGCACAAGCTGCAGCATCACCAGGGCAATGGAGGATCGCGTCTGACCG
TACCCCCGCCCCCGATGCCGCCTCCACCCACGTTTATGTCCACCTTCGTG
CCTACGGGCAGTGGAGGTGGTTCTTCCAAGGCTATGTCTGCCACTCCCGT
AGTCCTGAGCAGCGCCCCCAAACTTTATCAGTGCCGGCAGTCTGTGCACG
TGCCCACCGTGGCCGCCGCGCCCTCCATCGACATCAACGCCGTCTCTTTT
GACGTAACGCAGAAGCTGAAGAAGCTCAAGGCGGAAAAGTCTGGACCCAA
TCCCATTGCAGAGGAGGCCATTAAGGCAGCGCGCGCATCATCGGCGCTGC
AATCCTTCCAGACAACAGAGCGGAAAAAGAAAGACCGCAAGACGGTGCGT
ATCGCTGGCGGCACCGTGTGGGAGGATACTTCGCTGGCTGACTGGCCCGA
CGATGACTTCCGCATCTTTTGTGGTGACTTGGGAAACGACGTCAACGACG
AGGTCCTGACCCGGACCTTCAACAAGTTCCCCTCGTTTCAGCGGGCCCGT
GTGGTGCGGGACAAGCGCACGGGCAAGAGCAAGGGATTTGGCTTCGTGAG
CTTCAGAGAACCGGCCGACTTTATACGGGCCATGAAGGAGATGGACGGCC
GCTATGTGGGCAGCCGGCCTATCAAACTGCGCAAGAGCACGTGGCGACAA
CGCAGTCTTGACGTAGTTAAGAAAAAGGAGCGCGAAAAACAGGTGCTTCT
GCAGGCCTTCAATTCCATGACTTGAAAGCTTTCTAGACCAT
BS12324.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 15:58:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2931-RA | 909 | CG2931-PA | 1..909 | 17..925 | 4545 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:58:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2931-RA | 1114 | CG2931-RA | 95..1004 | 17..926 | 4550 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 15:58:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 5567612..5568521 | 926..17 | 4550 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 15:58:53 has no hits.
BS12324.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:45:25 Download gff for
BS12324.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2931-RA | 1..909 | 17..925 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:20:14 Download gff for
BS12324.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2931-RA | 86..1002 | 12..930 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:47:04 Download gff for
BS12324.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2931-RA | 95..1002 | 17..924 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:45:25 Download gff for
BS12324.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2931-RA | 86..1002 | 12..930 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:07:25 Download gff for
BS12324.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2931-RA | 95..1002 | 17..924 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:07:25 Download gff for
BS12324.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 5567614..5568521 | 17..924 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:47:04 Download gff for
BS12324.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 1393336..1394243 | 17..924 | 100 | | Minus |
BS12324.pep Sequence
Translation from 16 to 924
> BS12324.pep
MGTKRRNIEDELSRFEAEISKPPARNLFVPNQVRPIIAANTYQNSQHKLQ
HHQGNGGSRLTVPPPPMPPPPTFMSTFVPTGSGGGSSKAMSATPVVLSSA
PKLYQCRQSVHVPTVAAAPSIDINAVSFDVTQKLKKLKAEKSGPNPIAEE
AIKAARASSALQSFQTTERKKKDRKTVRIAGGTVWEDTSLADWPDDDFRI
FCGDLGNDVNDEVLTRTFNKFPSFQRARVVRDKRTGKSKGFGFVSFREPA
DFIRAMKEMDGRYVGSRPIKLRKSTWRQRSLDVVKKKEREKQVLLQAFNS
MT*
BS12324.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:37:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2931-PA | 302 | CG2931-PA | 1..302 | 1..302 | 1562 | 100 | Plus |
| CG34362-PI | 651 | CG34362-PI | 176..389 | 61..275 | 168 | 26.3 | Plus |
| CG34362-PF | 498 | CG34362-PF | 164..243 | 196..275 | 157 | 40 | Plus |
| CG34362-PA | 505 | CG34362-PA | 164..243 | 196..275 | 157 | 40 | Plus |
| CG34362-PJ | 508 | CG34362-PJ | 164..243 | 196..275 | 157 | 40 | Plus |
