BS12332.complete Sequence
608 bp assembled on 2006-11-01
GenBank Submission: FJ637143
> BS12332.complete
GAAGTTATCAGTCGACATGTCGAAACCAATTACCTTTGTCACCGGCAACG
CCAAGAAGCTGGAAGAGTTGGTTGCCATCCTGGGACCCAGTTTCCCGCGC
ACCATTGTGTCAAAGAAGATTGATCTTCCGGAATTGCAAGGCGACATCGA
CGAGATTGCCATCAAGAAGTGCAAGGAGGCAGCGCGTCAGGTGAATGGAC
CCGTGCTGGTGGAGGACACTAGTCTGTGCTTCAATGCGCTGGAGGGCTTG
CCGGGTCCGTACATCAAATGGTTCCTGGAGAAGCTGCAGCCGGAGGGGTT
ACACCGTCTGCTCCATGGTTGGGAGAACAAAAGCGCTCAGGCTATTTGCA
CCTTTGGCTACTGCGACGGTGTGGATGCCGAGCCTCTAATCTTTAAGGGC
ATCACCGAGGGCGTTATCGTCGAACCTCGCGGCCCCCGGGACTTTGGATG
GGATCCGGTTTTCCAGCCCAGTGGCTACGATAAGACCTACGCCGAACTGC
CCAAGTCCGAGAAGAACACCATTTCCCATCGCTACCGCGCTTTAGCTCTA
CTGCGGCAGCACTTCGAGAAACAGGACAAGTTAATAAACTAGAAGCTTTC
TAGACCAT
BS12332.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:54:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8891-RA | 576 | CG8891-PA | 1..576 | 17..592 | 2880 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:54:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8891-RA | 769 | CG8891-RA | 111..687 | 16..592 | 2885 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:54:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 4978775..4979087 | 451..139 | 1565 | 100 | Minus |
| 2L | 23513712 | 2L | 4978566..4978708 | 592..450 | 715 | 100 | Minus |
| 2L | 23513712 | 2L | 4979144..4979269 | 141..16 | 630 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 13:54:52 has no hits.
BS12332.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:45:03 Download gff for
BS12332.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8891-RA | 1..576 | 17..592 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:19:45 Download gff for
BS12332.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8891-RA | 98..689 | 7..597 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:35:29 Download gff for
BS12332.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8891-RA | 112..687 | 17..592 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:45:03 Download gff for
BS12332.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8891-RA | 98..689 | 7..597 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:29:37 Download gff for
BS12332.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8891-RA | 112..687 | 17..592 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:29:37 Download gff for
BS12332.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 4979145..4979268 | 17..140 | 100 | | Minus |
| 2L | 4978566..4978707 | 451..592 | 100 | <- | Minus |
| 2L | 4978776..4979085 | 141..450 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:35:29 Download gff for
BS12332.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 4978566..4978707 | 451..592 | 100 | <- | Minus |
| arm_2L | 4978776..4979085 | 141..450 | 100 | <- | Minus |
| arm_2L | 4979145..4979268 | 17..140 | 100 | | Minus |
BS12332.pep Sequence
Translation from 16 to 591
> BS12332.pep
MSKPITFVTGNAKKLEELVAILGPSFPRTIVSKKIDLPELQGDIDEIAIK
KCKEAARQVNGPVLVEDTSLCFNALEGLPGPYIKWFLEKLQPEGLHRLLH
GWENKSAQAICTFGYCDGVDAEPLIFKGITEGVIVEPRGPRDFGWDPVFQ
PSGYDKTYAELPKSEKNTISHRYRALALLRQHFEKQDKLIN*
BS12332.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:37:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8891-PA | 191 | CG8891-PA | 1..191 | 1..191 | 1015 | 100 | Plus |
