BS12335.complete Sequence
536 bp assembled on 2006-11-01
GenBank Submission: FJ637144
> BS12335.complete
GAAGTTATCAGTCGACATGATGGTTGAGTCCGATGGAACCGCCGACGCCA
CCCGCCGCCTAAACGTGAAGAAGCAAACACTGGACGATGCGTACGCCGTG
CCCGCCAACTTCCTGGAGATCGACGTGGTCAATCCGCTGACCACCATGGC
GGCGGGCAAGAAGCGCTACACGGACTACGAGGTCCGGATGCGGACCAATC
TGCCCGTCTTTAAGGTAAAGGAGTCCAGTGTCAGGCGACGCTACAGCGAC
TTTGAGTGGCTGCGAAACGAGCTGGAGCGGGATAGCAAGATTGTGGTGCC
ACCACTCCCAGGAAAGGCATGGAAGCGGCAGATGCCCTTCCGCGGCGACG
AGGGCATCTTTGACGAAAGCTTCATCGAGGAGCGGCGCAAGGGACTGGAG
GCCTTCATCAACAAGATAGCCGGACATCCGCTGGCGCAGAACGAGCGCTG
CCTGCATATGTTCCTGCAGGAGAATGTCATAGATAAGAACTACGTGCCCG
GCAAGATTCGGAACACATAAAAGCTTTCTAGACCAT
BS12335.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 08:00:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Snx3-RB | 504 | CG6359-PB | 1..504 | 17..520 | 2520 | 100 | Plus |
Snx3-RA | 504 | CG6359-PA | 1..504 | 17..520 | 2520 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:00:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Snx3-RB | 1860 | CG6359-RB | 314..817 | 17..520 | 2520 | 100 | Plus |
Snx3-RA | 1426 | CG6359-RA | 314..817 | 17..520 | 2520 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 08:00:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 12629220..12629452 | 288..520 | 1165 | 100 | Plus |
3R | 32079331 | 3R | 12628344..12628520 | 17..193 | 885 | 100 | Plus |
3R | 32079331 | 3R | 12628888..12628984 | 193..289 | 485 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 08:00:16 has no hits.
BS12335.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:45:04 Download gff for
BS12335.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6359-RA | 1..504 | 17..520 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:19:46 Download gff for
BS12335.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6359-RA | 297..814 | 9..526 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:28:20 Download gff for
BS12335.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Snx3-RA | 314..815 | 17..518 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:45:04 Download gff for
BS12335.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6359-RA | 297..814 | 9..526 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:09:06 Download gff for
BS12335.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Snx3-RA | 314..815 | 17..518 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:09:06 Download gff for
BS12335.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 12628344..12628520 | 17..193 | 100 | -> | Plus |
3R | 12628889..12628984 | 194..289 | 100 | -> | Plus |
3R | 12629222..12629450 | 290..518 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:28:20 Download gff for
BS12335.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 8454066..8454242 | 17..193 | 100 | -> | Plus |
arm_3R | 8454611..8454706 | 194..289 | 100 | -> | Plus |
arm_3R | 8454944..8455172 | 290..518 | 100 | | Plus |
BS12335.pep Sequence
Translation from 16 to 519
> BS12335.pep
MMVESDGTADATRRLNVKKQTLDDAYAVPANFLEIDVVNPLTTMAAGKKR
YTDYEVRMRTNLPVFKVKESSVRRRYSDFEWLRNELERDSKIVVPPLPGK
AWKRQMPFRGDEGIFDESFIEERRKGLEAFINKIAGHPLAQNERCLHMFL
QENVIDKNYVPGKIRNT*
BS12335.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:37:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Snx3-PB | 167 | CG6359-PB | 1..167 | 1..167 | 872 | 100 | Plus |
Snx3-PA | 167 | CG6359-PA | 1..167 | 1..167 | 872 | 100 | Plus |