BS12341.complete Sequence
389 bp assembled on 2006-11-01
GenBank Submission: FJ637147
> BS12341.complete
GAAGTTATCAGTCGACATGGCGAGCTCCGTAATTCTGGCGGGTCTTAGCG
TGGCCGCCGTGGGATTCGCCGGAAAGCACCTGATGCGCCGCATGCCCCAG
ATGACCACCAAATTCAACGAGGCCCTCAAGAACCTGCCCAAATACGATGC
GGAGAGCATGGCCGCCTCCAAATACTACAAGGGCGGCTTCGATCCCAAGA
TGAACAAGCGGGAGGCGTCCCTAATCCTAGGTGTCAGCCCCAGTGCGTCC
AAGATAAAGATTAAGGACGCGCACAAGAAGATCATGCTGTTGAACCATCC
GGATCGAGGAGGATCTCCCTATTTGGCGGCCAAGATCAACGAGGCCAAAG
ACTTTCTGGACAAAGCGAAGTAGAAGCTTTCTAGACCAT
BS12341.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:56:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7394-RC | 357 | CG7394-PC | 1..357 | 17..373 | 1785 | 100 | Plus |
CG7394-RD | 357 | CG7394-PD | 1..357 | 17..373 | 1785 | 100 | Plus |
CG7394-RA | 357 | CG7394-PA | 1..357 | 17..373 | 1785 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:56:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7394-RC | 1315 | CG7394-RC | 63..419 | 17..373 | 1785 | 100 | Plus |
CG7394-RD | 1431 | CG7394-RD | 179..535 | 17..373 | 1785 | 100 | Plus |
CG7394-RA | 534 | CG7394-RA | 63..419 | 17..373 | 1785 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:56:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 11562860..11563100 | 19..259 | 1205 | 100 | Plus |
3L | 28110227 | 3L | 11563301..11563416 | 258..373 | 580 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 13:56:18 has no hits.
BS12341.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:47:24 Download gff for
BS12341.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7394-RA | 1..357 | 17..373 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:35:20 Download gff for
BS12341.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7394-RA | 50..413 | 9..373 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:29:09 Download gff for
BS12341.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7394-RA | 63..419 | 17..373 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:47:25 Download gff for
BS12341.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7394-RA | 50..413 | 9..373 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:59:33 Download gff for
BS12341.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7394-RA | 63..419 | 17..373 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:59:33 Download gff for
BS12341.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 11562858..11563100 | 17..259 | 99 | -> | Plus |
3L | 11563303..11563416 | 260..373 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:29:09 Download gff for
BS12341.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 11555958..11556200 | 17..259 | 99 | -> | Plus |
arm_3L | 11556403..11556516 | 260..373 | 100 | | Plus |
BS12341.pep Sequence
Translation from 16 to 372
> BS12341.pep
MASSVILAGLSVAAVGFAGKHLMRRMPQMTTKFNEALKNLPKYDAESMAA
SKYYKGGFDPKMNKREASLILGVSPSASKIKIKDAHKKIMLLNHPDRGGS
PYLAAKINEAKDFLDKAK*
BS12341.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:26:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7394-PC | 118 | CG7394-PC | 1..118 | 1..118 | 595 | 100 | Plus |
CG7394-PD | 118 | CG7394-PD | 1..118 | 1..118 | 595 | 100 | Plus |
CG7394-PA | 118 | CG7394-PA | 1..118 | 1..118 | 595 | 100 | Plus |
CG7394-PB | 128 | CG7394-PB | 12..128 | 2..118 | 590 | 100 | Plus |
CG32727-PA | 122 | CG32727-PA | 53..114 | 47..114 | 142 | 44.1 | Plus |