BS12351.complete Sequence
446 bp assembled on 2006-11-01
> BS12351.complete
GAAGTTATCAGTCGACATGGCCGCCAACCAGAAGATTGTGTTCGCCCTCG
TCTGCCTCTTTTTGGCATGTGATTTGGTGCTGGGTCAGCAGCAGGCGGCC
AACAGCTCGGATTCGGATTCGGATGTGGCGGAAAGTCGTACTTTTGGCCA
TCATTTCCTGCGGCGCATCAGCTTCGCCTTGGTGCCCGGCGCCTTTGTCG
TGGGCGTGATCACCACCCTGCTGGCGGCCTTGACCGTCGTCTCCATCAAG
GGACTGGGCGTGGGTGTCATCCTGCTGGTGCTGGCCATCGGACAAATGCT
GTCCCGTGCTCTTCCCGTCCAGGCAGCCGCCGCCTATGCCGCAGCACCCG
TTCCCGTCCAGGCACCCGTGCCGGTGGTCTACTCCCACTCGCACACCCAG
CAGCCCGTCTGGTTGGAGAAGGAGTGGTAGAAGCTTTCTAGACCAT
BS12351.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 15:37:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15887-RA | 414 | CG15887-PA | 1..414 | 17..430 | 2070 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:37:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15887-RA | 863 | CG15887-RA | 103..522 | 12..431 | 2085 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 15:37:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 13287996..13288296 | 431..131 | 1505 | 100 | Minus |
3R | 32079331 | 3R | 13288592..13288711 | 131..12 | 585 | 99.2 | Minus |
Blast to na_te.dros performed on 2014-11-27 15:37:52 has no hits.
BS12351.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:45:08 Download gff for
BS12351.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15887-RA | 1..414 | 17..430 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:19:52 Download gff for
BS12351.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15887-RA | 94..525 | 7..437 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:48:16 Download gff for
BS12351.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15887-RA | 108..521 | 17..430 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:45:08 Download gff for
BS12351.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15887-RA | 94..525 | 7..437 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:12:29 Download gff for
BS12351.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15887-RA | 108..521 | 17..430 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 16:12:29 Download gff for
BS12351.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 13287997..13288295 | 132..430 | 100 | <- | Minus |
3R | 13288592..13288706 | 17..131 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:48:16 Download gff for
BS12351.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 9113719..9114017 | 132..430 | 100 | <- | Minus |
arm_3R | 9114314..9114428 | 17..131 | 100 | | Minus |
BS12351.pep Sequence
Translation from 16 to 429
> BS12351.pep
MAANQKIVFALVCLFLACDLVLGQQQAANSSDSDSDVAESRTFGHHFLRR
ISFALVPGAFVVGVITTLLAALTVVSIKGLGVGVILLVLAIGQMLSRALP
VQAAAAYAAAPVPVQAPVPVVYSHSHTQQPVWLEKEW*
BS12351.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 01:06:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15887-PA | 137 | CG15887-PA | 1..137 | 1..137 | 681 | 100 | Plus |