BS12355.complete Sequence
575 bp assembled on 2006-11-01
GenBank Submission: FJ637149
> BS12355.complete
GAAGTTATCAGTCGACATGGGACTAACAATATCTAGTCTTTTGACACGTT
TGTTTGGAAAAAAACAAATGCGTATTCTTATGGTTGGCTTGGATGCTGCT
GGAAAAACGACTATTCTGTACAAATTAAAGCTGGGTGAAATTGTAACCAC
CATACCAACCATAGGCTTCAATGTCGAGACTGTGGAATATAAGAATATAT
GTTTTACCGTTTGGGATGTTGGTGGCCAAGACAAAATTCGCCCGTTGTGG
CGACACTATTTCCAAAATACACAGGGTCTTATATTTGTAGTGGATTCCAA
CGACCGCGATCGTATAACTGAAGCTGAAAGAGAACTACAGAACATGCTCC
AGGAGGATGAACTTAGGGACGCGGTACTTTTGGTTTTTGCCAACAAACAG
GACCTACCGAATGCAATGACAGCTGCCGAGCTTACGGACAAGTTGCGCCT
TAACCAATTAAGGAATCGCCACTGGTTTATTCAGTCTACATGTGCTACCC
AAGGGCACGGTCTTTATGAAGGACTTGATTGGCTATCAGCTGAATTGGCT
AAAAAATAAAAGCTTTCTAGACCAT
BS12355.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:47:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Arf102F-RB | 543 | CG11027-PB | 1..543 | 17..559 | 2715 | 100 | Plus |
Arf102F-RA | 543 | CG11027-PA | 1..543 | 17..559 | 2715 | 100 | Plus |
Arf79F-RJ | 549 | CG8385-PJ | 64..299 | 80..315 | 520 | 81.4 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:47:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Arf102F-RB | 718 | CG11027-RB | 97..643 | 15..561 | 2735 | 100 | Plus |
Arf102F-RA | 930 | CG11027-RA | 97..643 | 15..561 | 2735 | 100 | Plus |
Arf79F-RJ | 1464 | CG8385-RJ | 405..640 | 80..315 | 520 | 81.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:47:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
4 | 1348131 | 4 | 1124435..1124698 | 83..346 | 1320 | 100 | Plus |
4 | 1348131 | 4 | 1124767..1124893 | 346..472 | 635 | 100 | Plus |
4 | 1348131 | 4 | 1124950..1125038 | 473..561 | 445 | 100 | Plus |
4 | 1348131 | 4 | 1124263..1124331 | 15..83 | 345 | 100 | Plus |
3L | 28110227 | 3L | 22869666..22869777 | 273..162 | 305 | 84.8 | Minus |
Blast to na_te.dros performed on 2014-11-27 14:47:11 has no hits.
BS12355.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:45:10 Download gff for
BS12355.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Arf102F-RA | 1..543 | 17..559 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:19:55 Download gff for
BS12355.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Arf102F-RA | 90..642 | 15..567 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:51:45 Download gff for
BS12355.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Arf102F-RA | 99..632 | 17..550 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:45:11 Download gff for
BS12355.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Arf102F-RA | 90..642 | 15..567 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:18:35 Download gff for
BS12355.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Arf102F-RA | 99..632 | 17..550 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:18:35 Download gff for
BS12355.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
4 | 1124950..1125027 | 473..550 | 100 | | Plus |
4 | 1124265..1124331 | 17..83 | 100 | -> | Plus |
4 | 1124436..1124698 | 84..346 | 100 | -> | Plus |
4 | 1124768..1124893 | 347..472 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:51:45 Download gff for
BS12355.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_4 | 1145062..1145324 | 84..346 | 100 | -> | Plus |
arm_4 | 1145394..1145519 | 347..472 | 100 | -> | Plus |
arm_4 | 1145576..1145653 | 473..550 | 100 | | Plus |
arm_4 | 1144891..1144957 | 17..83 | 100 | -> | Plus |
BS12355.pep Sequence
Translation from 16 to 558
> BS12355.pep
MGLTISSLLTRLFGKKQMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIG
FNVETVEYKNICFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRI
TEAERELQNMLQEDELRDAVLLVFANKQDLPNAMTAAELTDKLRLNQLRN
RHWFIQSTCATQGHGLYEGLDWLSAELAKK*
BS12355.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:37:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Arf102F-PB | 180 | CG11027-PB | 1..180 | 1..180 | 932 | 100 | Plus |
Arf102F-PA | 180 | CG11027-PA | 1..180 | 1..180 | 932 | 100 | Plus |
Arf79F-PJ | 182 | CG8385-PJ | 1..177 | 1..177 | 767 | 83.1 | Plus |
Arf79F-PI | 182 | CG8385-PI | 1..177 | 1..177 | 767 | 83.1 | Plus |
Arf79F-PH | 182 | CG8385-PH | 1..177 | 1..177 | 767 | 83.1 | Plus |