BS12358.complete Sequence
563 bp assembled on 2006-11-01
GenBank Submission: FJ637150
> BS12358.complete
GAAGTTATCAGTCGACATGGATGCAACTGCAGCAATCACCGGCAATGTGG
ACAAGACCCAGATACCGCCGCTGAACCAGAAACGCATCCTGGCCTTCGTT
AACCATTTCCTCGTCAGCACCTGCACCTTTCTAAATGAATTTGCCCTGGG
CTGTGAGACGAAGTTCGTGGAGATGGAACGGCAGCTGCAGAAGACGGAGG
CCGCCCTCATCATCCTGGAGGCCAAGCTGGCGTCTATACCCACCGAGCAC
CATGTAGCGACTGAGGCTACCGAAGCGCCAGCGATATCAAACCAGCAACG
CAACGAAGAAGCATCCATGGTGGACACCACGGAACCACCGACCACCGAGA
ATCCTACGGAGCCGGAACTCCCGCCTGAATCGGTTGGTGTGCGCGCCTGT
GAAGATCAACGTTACAGAAAGTTCTTCAAAATGGTGCAAGTGGGTGTGCC
CGCACCGGCGGTTAAGCAGAAAATGCAATCCGAAGGTCTGGAGCCGCGTA
TTTTAGACACACCCGATCTGATCCTGGCGGATGGCCAGCGAGAGTGAAAG
CTTTCTAGACCAT
BS12358.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:03:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7429-RA | 531 | CG7429-PA | 1..531 | 17..547 | 2655 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:03:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7429-RA | 655 | CG7429-RA | 44..574 | 17..547 | 2655 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 10:03:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 8041249..8041698 | 58..507 | 2250 | 100 | Plus |
2L | 23513712 | 2L | 8041149..8041193 | 17..61 | 225 | 100 | Plus |
2L | 23513712 | 2L | 8041759..8041798 | 508..547 | 200 | 100 | Plus |
Blast to na_te.dros performed 2014-11-27 10:03:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Rt1c | 5443 | Rt1c RT1C 5443bp | 4334..4392 | 168..224 | 119 | 69.5 | Plus |
BS12358.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:45:11 Download gff for
BS12358.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7429-RA | 1..531 | 17..547 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:19:57 Download gff for
BS12358.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7429-RA | 35..572 | 17..556 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:15:06 Download gff for
BS12358.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7429-RA | 44..573 | 17..546 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:45:12 Download gff for
BS12358.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7429-RA | 35..572 | 17..556 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:11:43 Download gff for
BS12358.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7429-RA | 44..573 | 17..546 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:11:43 Download gff for
BS12358.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 8041759..8041797 | 508..546 | 100 | | Plus |
2L | 8041149..8041193 | 17..61 | 100 | -> | Plus |
2L | 8041253..8041698 | 62..507 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:15:06 Download gff for
BS12358.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 8041253..8041698 | 62..507 | 100 | -> | Plus |
arm_2L | 8041759..8041797 | 508..546 | 100 | | Plus |
arm_2L | 8041149..8041193 | 17..61 | 100 | -> | Plus |
BS12358.pep Sequence
Translation from 16 to 546
> BS12358.pep
MDATAAITGNVDKTQIPPLNQKRILAFVNHFLVSTCTFLNEFALGCETKF
VEMERQLQKTEAALIILEAKLASIPTEHHVATEATEAPAISNQQRNEEAS
MVDTTEPPTTENPTEPELPPESVGVRACEDQRYRKFFKMVQVGVPAPAVK
QKMQSEGLEPRILDTPDLILADGQRE*
BS12358.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:37:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7429-PA | 176 | CG7429-PA | 1..176 | 1..176 | 899 | 100 | Plus |