BS12359.complete Sequence
839 bp assembled on 2007-07-13
GenBank Submission: FJ637151
> BS12359.complete
GAAGTTATCAGTCGACATGAAGCTGTTCCTACTTACACTCTCCGTGGCCC
TAGCCGTGGTCGCCGCCTCCCCAGGCTTCAACCGCACCAGCCTTCTGCCC
CAGGTGACCATTTCCGAGGGTGCCGAGGGCCGCATCGTCAACGGTTACCC
AGCGCCCGAGGGAAAGGCTCCCTACATTGTGGGACTGTTGATCCGCACCG
ATGGAAGCAACAGTGCCGCGGTTGGAGCTGGAACCATCATCGCCAGCGAC
TGGATTCTGACCGCCGCTCACTGTCTGACCACCGACTACGTGGAGATCCA
CTATGGATCCAACTGGGGCTGGAACGGAGCTTTCAGGCAATCTGTCCGCC
GTGACAACTTTATCAGCCATCCAAACTGGCCCGCTGAGGGCGGTCGTGAC
ATCGGTCTGATCCGCACTCCCTCCGTGGGCTTCACCGACTTGATCAACAA
GGTCGCCCTGCCAAGCTTCAGCGAGGAGAGCGACCGCTTCGTGGACACAT
GGTGCGTTGCCTGCGGATGGGGCGGCATGGACAATGGCAACCTGGCCGAC
TGGCTGCAGTGCATGGACGTCCAGATCATCAGCAACAGCGAGTGCGAGCA
GTCCTACGGCACCGTGGCCAGCACTGACATGTGCACGCGCCGCACCGATG
GCAAATCCTCTTGCGGAGGCGACTCTGGTGGTCCACTCGTTACCCATGAC
AACGCTCGGCTAGTGGGAGTGATTACCTTTGGCTCGGTGGACTGCCACAG
CGGTCCTTCCGGCTACACCCGCGTCACCGACTACTTGGGATGGATCCGTG
ACAACACCGGCATCTCCTACTAAAAGCTTTCTAGACCAT
BS12359.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:53:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18179-RA | 807 | CG18179-PA | 1..807 | 17..823 | 4035 | 100 | Plus |
| CG18180-RA | 795 | CG18180-PA | 85..795 | 113..823 | 1695 | 82.6 | Plus |
| CG8329-RA | 780 | CG8329-PA | 352..752 | 398..798 | 430 | 73.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:53:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18179-RA | 870 | CG18179-RA | 18..826 | 16..824 | 4045 | 100 | Plus |
| CG18180-RA | 901 | CG18180-RA | 104..814 | 113..823 | 1695 | 82.6 | Plus |
| CG8329-RA | 910 | CG8329-RA | 367..767 | 398..798 | 430 | 73.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:53:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 9639288..9640096 | 16..824 | 4045 | 100 | Plus |
| 3L | 28110227 | 3L | 9641116..9641826 | 113..823 | 1695 | 82.6 | Plus |
| 3L | 28110227 | 3L | 9638478..9638878 | 398..798 | 430 | 73.8 | Plus |
| 3R | 32079331 | 3R | 29922975..29923039 | 759..823 | 190 | 86.2 | Plus |
| 3R | 32079331 | 3R | 29923790..29923854 | 823..759 | 190 | 86.2 | Minus |
| 3R | 32079331 | 3R | 30487094..30487154 | 829..769 | 185 | 86.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 00:53:21 has no hits.
BS12359.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:25:44 Download gff for
BS12359.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18179-RA | 1..807 | 17..823 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:57:12 Download gff for
BS12359.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18179-RA | 13..830 | 10..833 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:01:42 Download gff for
BS12359.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18179-RA | 19..823 | 17..821 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:25:44 Download gff for
BS12359.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18179-RA | 13..830 | 10..833 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:28:28 Download gff for
BS12359.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18179-RA | 19..823 | 17..821 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:28:28 Download gff for
BS12359.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 9639289..9640093 | 17..821 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:01:42 Download gff for
BS12359.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 9632389..9633193 | 17..821 | 100 | | Plus |
BS12359.pep Sequence
Translation from 16 to 822
> BS12359.pep
MKLFLLTLSVALAVVAASPGFNRTSLLPQVTISEGAEGRIVNGYPAPEGK
APYIVGLLIRTDGSNSAAVGAGTIIASDWILTAAHCLTTDYVEIHYGSNW
GWNGAFRQSVRRDNFISHPNWPAEGGRDIGLIRTPSVGFTDLINKVALPS
FSEESDRFVDTWCVACGWGGMDNGNLADWLQCMDVQIISNSECEQSYGTV
ASTDMCTRRTDGKSSCGGDSGGPLVTHDNARLVGVITFGSVDCHSGPSGY
TRVTDYLGWIRDNTGISY*
BS12359.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:13:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18179-PA | 268 | CG18179-PA | 1..268 | 1..268 | 1443 | 100 | Plus |
| CG18180-PA | 264 | CG18180-PA | 1..264 | 1..268 | 1221 | 83.6 | Plus |
| CG8329-PA | 259 | CG8329-PA | 4..258 | 2..268 | 872 | 62.9 | Plus |
| Jon25Bi-PB | 266 | CG8867-PB | 1..265 | 1..268 | 631 | 49.3 | Plus |
| Jon25Biii-PA | 258 | CG8871-PA | 1..258 | 1..268 | 627 | 48.5 | Plus |
