BS12361.complete Sequence
959 bp assembled on 2006-11-01
GenBank Submission: FJ637152
> BS12361.complete
GAAGTTATCAGTCGACATGGCCAATCTGCGTCCCCTGAGCGCCGAACTTC
GTCGCATTGCTGAAACGGAGCTAAACGAAGTGGAGGAGCGAGTGCCCGCG
GATCTGAAAGCTCTTCGGGATTGGTTGGCCAAGCAACCTCATCTGAGGGC
CCGCCAGGATGACCAGTTCCTAGTTGGCTTCTTGCGAGGCTGCAAGTTTA
GCCTGGAGAAGACCAAGTCCAAGCTGGATCACTTTTATACTATTAAGACG
CTTATGCCTGAGCTCTTCGGCAAAAGATTGGTGGACGAAAGGAACCTAAT
CTTGTGCAGATCTGGAACCTATGTTCGATTGCCCAAACCTTGGGGAACCG
ATGGCCCCCGCCTGCAGCTTACGAACTATGAGAAATTCGACCCTAAGGAA
TTCAAGTTATTGGATCTCTTCCGCTACCAAACCATGATAACGGAACAGTC
AATCCGTGAGGATGACCACAGCAACATTAGCGGCTACGTCGAGATCGTTG
ACATGGCCAAAATGAGCCTCAGTTTTCTGGCCCAACTGGATTTCACGCTC
ATCAAAAGGATGGGAATATTCGCTGAGAAGGCACAGCCCACTCGCTTGAA
AGGAGTCCATCTGATCAATTGCCCCAAGGAGGGAGTGGCGTTACTGAATT
TGGCCAAGAGCCTAATGCCCAGCAAGCTCCAGCAGCGGTTTCACGTGTAT
AAAAATCTCGAGCAATTAAACGAGGTGATACCACGCGAATACCTGCCGGA
AGAATATGGTGGCAACAATGGACGTATAGCCGACATTCAGGCGGAAGCGG
AGAAGAAATTGCTGTCCTATGAGAGCTATTTTGCTGAGGATTCCCAGTAC
GGAGTGGATGAGCAGCTGCGGCCTGGAAAGCGTGTTAATGCGGATTCAAT
TTTTGGCGCTGAGGGATCCTTCCGAAAACTCGACATCGATTAAAAGCTTT
CTAGACCAT
BS12361.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:04:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30339-RA | 927 | CG30339-PA | 1..927 | 17..943 | 4635 | 100 | Plus |
| CG12926-RA | 942 | CG12926-PA | 128..237 | 129..238 | 235 | 80.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:04:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30339-RA | 1023 | CG30339-RA | 42..969 | 17..944 | 4640 | 100 | Plus |
| CG12926-RA | 1347 | CG12926-RA | 312..421 | 129..238 | 235 | 80.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:04:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 9602127..9602500 | 688..315 | 1870 | 100 | Minus |
| 2R | 25286936 | 2R | 9602562..9602860 | 315..17 | 1495 | 100 | Minus |
| 2R | 25286936 | 2R | 9601485..9601741 | 944..688 | 1285 | 100 | Minus |
| 2R | 25286936 | 2R | 9609173..9609282 | 238..129 | 235 | 80.9 | Minus |
Blast to na_te.dros performed on 2014-11-26 22:04:43 has no hits.
BS12361.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:45:13 Download gff for
BS12361.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30339-RA | 1..927 | 17..943 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:19:58 Download gff for
BS12361.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30339-RA | 42..969 | 17..944 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:45:56 Download gff for
BS12361.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30339-RA | 42..966 | 17..941 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:45:13 Download gff for
BS12361.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30339-RA | 42..969 | 17..944 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:50:34 Download gff for
BS12361.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30339-RA | 42..966 | 17..941 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:50:34 Download gff for
BS12361.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 9602562..9602860 | 17..315 | 100 | | Minus |
| 2R | 9601488..9601740 | 689..941 | 100 | <- | Minus |
| 2R | 9602127..9602499 | 316..688 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:45:56 Download gff for
BS12361.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 5490067..5490365 | 17..315 | 100 | | Minus |
| arm_2R | 5488993..5489245 | 689..941 | 100 | <- | Minus |
| arm_2R | 5489632..5490004 | 316..688 | 100 | <- | Minus |
BS12361.pep Sequence
Translation from 16 to 942
> BS12361.pep
MANLRPLSAELRRIAETELNEVEERVPADLKALRDWLAKQPHLRARQDDQ
FLVGFLRGCKFSLEKTKSKLDHFYTIKTLMPELFGKRLVDERNLILCRSG
TYVRLPKPWGTDGPRLQLTNYEKFDPKEFKLLDLFRYQTMITEQSIREDD
HSNISGYVEIVDMAKMSLSFLAQLDFTLIKRMGIFAEKAQPTRLKGVHLI
NCPKEGVALLNLAKSLMPSKLQQRFHVYKNLEQLNEVIPREYLPEEYGGN
NGRIADIQAEAEKKLLSYESYFAEDSQYGVDEQLRPGKRVNADSIFGAEG
SFRKLDID*
BS12361.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:37:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30339-PA | 308 | CG30339-PA | 1..308 | 1..308 | 1588 | 100 | Plus |
| CG12926-PA | 313 | CG12926-PA | 8..313 | 3..308 | 795 | 46.7 | Plus |
| CG33966-PA | 310 | CG33966-PA | 1..310 | 1..308 | 672 | 42.6 | Plus |
| CG33514-PA | 311 | CG33514-PA | 5..311 | 4..308 | 644 | 42.3 | Plus |
| CG31636-PB | 313 | CG31636-PB | 1..313 | 1..308 | 640 | 42.8 | Plus |
