BS12363.complete Sequence
1079 bp assembled on 2006-11-01
GenBank Submission: FJ637153
> BS12363.complete
GAAGTTATCAGTCGACATGGGAGCCACTAGTGTCGGAGTTCCAGTCTGGA
AGATTCAGCTACTGATTCTGCTGAGTGCAGTTGTTCTCACCATTCAAGCT
GCTCCTGTCGAGGTAACCGAAGGAGTGACCCAACCCCCAGCCGAGAAGCT
GCAAACGGAGTCTCGTTCCCGTAAAGATGAAGAGCTGGAACTAGAAGAAG
ACCTGGATGGACGTAATGCCTATATCAACAATCAGTTTGTGCCAAGCGAA
CCTGCAGAAGTCCTAGAGGATGTGCAGAATACGCCGCTCTACGAGATCCT
TCAAAAGCAGATGGAACAAGTGTTGGCCTCATCGGCTCCCAATGACCCTG
TCTACGAGCAGCACCGCGAGAAGCAGGATCGTCGCGATCAGAAACCACCA
CACCAGCCACCGTACTTCTCCGGCGGAGATCGAGATGGTGATCTACAGGA
TGACTACGAGGACGAGGAGGATCAGACGGATCAGGGTTATCCGTCGGACC
CCGAGAAACCGGACGCCGTGTCAGATGCTCCCGAGGATGAGGACCCAGGC
TACCAGGCACCTTCGTTGAGCCTTCCAACCACCACCACTCGCAAACCGTA
CAGACGACGCAGCACAACCACTTTTCAGCCACGAACCACCAGGACAAGAA
CCACTGCTCAGCCCAGGATCTCGGAAAGTCCATTGAACCAAACCAGCACC
ACAGAGCAATCACCAAATGTGACCACCAGCACTCCACGGCCCAAGATTGG
TTCCAGCACCAAACCCAAGGCAAATCCTCAGCCGGGAAACAGCCTGCCAA
GTGACCCGCAGGTTTACCAGCACAAGCGTCGCATCATCTTCAAGACCATC
TCAACGGGCTCGCAATTCGTCAACTCGCCAATTGGCGACCTAATGATCAA
GTTCTCAATCGGATTTGCCAAGCCAACCACTCCGGGTGGAGCTACCAGCA
CTGCGGGTTCACATAGTTCGTCCAGTGAGGCTTTACGTGCTCTTTCGCAA
AACTTAATTCGAAATTTTGAACTTCAAAAACTAAGAAGAGCCAATAAAGT
GCAAAAATATTAGAAGCTTTCTAGACCAT
BS12363.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:42:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14110-RA | 1047 | CG14110-PA | 1..1047 | 17..1063 | 5235 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:42:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14110-RA | 1085 | CG14110-RA | 23..1070 | 17..1064 | 5240 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:42:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 13384925..13385910 | 79..1064 | 4930 | 100 | Plus |
| 3L | 28110227 | 3L | 13384811..13384874 | 17..80 | 320 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 13:42:08 has no hits.
BS12363.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:45:14 Download gff for
BS12363.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14110-RA | 1..1047 | 17..1063 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:20:00 Download gff for
BS12363.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14110-RA | 21..1068 | 17..1064 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:32:12 Download gff for
BS12363.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14110-RA | 23..1069 | 17..1063 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:45:14 Download gff for
BS12363.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14110-RA | 21..1068 | 17..1064 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:24:38 Download gff for
BS12363.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14110-RA | 23..1069 | 17..1063 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:24:38 Download gff for
BS12363.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 13384811..13384874 | 17..80 | 100 | -> | Plus |
| 3L | 13384927..13385909 | 81..1063 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:32:12 Download gff for
BS12363.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 13377911..13377974 | 17..80 | 100 | -> | Plus |
| arm_3L | 13378027..13379009 | 81..1063 | 100 | | Plus |
BS12363.pep Sequence
Translation from 16 to 1062
> BS12363.pep
MGATSVGVPVWKIQLLILLSAVVLTIQAAPVEVTEGVTQPPAEKLQTESR
SRKDEELELEEDLDGRNAYINNQFVPSEPAEVLEDVQNTPLYEILQKQME
QVLASSAPNDPVYEQHREKQDRRDQKPPHQPPYFSGGDRDGDLQDDYEDE
EDQTDQGYPSDPEKPDAVSDAPEDEDPGYQAPSLSLPTTTTRKPYRRRST
TTFQPRTTRTRTTAQPRISESPLNQTSTTEQSPNVTTSTPRPKIGSSTKP
KANPQPGNSLPSDPQVYQHKRRIIFKTISTGSQFVNSPIGDLMIKFSIGF
AKPTTPGGATSTAGSHSSSSEALRALSQNLIRNFELQKLRRANKVQKY*
BS12363.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:37:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14110-PA | 348 | CG14110-PA | 1..348 | 1..348 | 1799 | 100 | Plus |
