BS12374.complete Sequence
686 bp assembled on 2006-11-01
GenBank Submission: FJ638844
> BS12374.complete
GAAGTTATCAGTCGACATGTGGCAGCGACAGGTGTTGGTGCTCGTCATTT
GCGGGCTCATAACAATGGAGGTGGCGAGGTGCAGCGCCAGCCGCTTTAAT
GGCGCCACTTCCGCCGGCAACCAGAACCCGCAGCTAAAGCTGGAGATGAA
TGCTTGGCAGCCATTCACCCAGCACAACAATTGGCTCATCCTCCAGGCGA
CAGCACCCAGTTCCATGCAGCAGCCGGAGCGGGTGGAGATCCGAGAAAGG
CGAAAGGAACCGGAACGACTTCCTGTCAATTTCTACGCCTACAACCATCG
CTATAACGAGAGCTCCCCAACGCCGGTCGGAAATTACAAACCGAATCCTC
CCATCGATCCATCCAGCTATGTTCTGGCCATCAGCCAGCAGATGCGGCGG
GGCCAACTCCTTCGCCAGCTGGCAAAAGCGGAGGATGCCGAGCCGGAAGT
TCACAAGGTGGCTGCGACTTTAACCCACCCGGTTAATGGTGATGACGATA
ATAATCAAGATGATGAAAACAGAATCCTTCCCGGGGGACCAGAGGATAGC
GAACAGGGGTCACTTCGGGGTGTTGAATCCTACTTGGCGCCCTTTGAACG
AGCCCTGGTGAAAGTGCGCAACTTCTGCGACGCCCTGAGAAGCGTGATTA
GCGACGAGGCAGGTGGGTAAAAGCTTTCTAGACCAT
BS12374.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:14:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15594-RB | 972 | CG15594-PB | 1..598 | 65..662 | 2990 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:14:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15594-RB | 1454 | CG15594-RB | 87..732 | 17..662 | 3230 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 10:14:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 6287819..6288473 | 17..671 | 3275 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 10:14:54 has no hits.
BS12374.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:44:51 Download gff for
BS12374.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15594-RA | 1..654 | 17..670 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:19:32 Download gff for
BS12374.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15594-RA | 85..742 | 17..677 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 10:06:24 Download gff for
BS12374.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15594-RB | 87..737 | 17..668 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:44:51 Download gff for
BS12374.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15594-RA | 85..742 | 17..677 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:16:52 Download gff for
BS12374.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15594-RB | 87..737 | 17..668 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:16:52 Download gff for
BS12374.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 6287819..6288470 | 17..668 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 10:06:24 Download gff for
BS12374.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 2113541..2114192 | 17..668 | 100 | | Plus |
BS12374.pep Sequence
Translation from 16 to 669
> BS12374.pep
MWQRQVLVLVICGLITMEVARCSASRFNGATSAGNQNPQLKLEMNAWQPF
TQHNNWLILQATAPSSMQQPERVEIRERRKEPERLPVNFYAYNHRYNESS
PTPVGNYKPNPPIDPSSYVLAISQQMRRGQLLRQLAKAEDAEPEVHKVAA
TLTHPVNGDDDNNQDDENRILPGGPEDSEQGSLRGVESYLAPFERALVKV
RNFCDALRSVISDEAGG*
BS12374.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:38:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15594-PB | 323 | CG15594-PB | 1..199 | 17..215 | 1047 | 100 | Plus |
