BS12383.complete Sequence
539 bp assembled on 2006-11-01
GenBank Submission: FJ637154
> BS12383.complete
GAAGTTATCAGTCGACATGAAGAGACTTAAAGCGTACCTAAAGGATGGCA
TCAATGTGGCGGCGGTAATGTGTCTGGGCGATACTATATCCCAGTTCTTT
TTTGATAAGAAATCGTTGGACGAATGGGATGCGGGGCGAACCCTCCGTTT
CGGCATCGTTGGACTGGTGTTCGTTGGCCCAACTTTGCGCCGGTGGTACC
ATTTTTTGGAGTCCCGGGTTCCCAAAACCTACTCGCCAATGCGGCGGGGC
GTTACCAAAATGCTGGTCGACCAGACCCTTTTTGCGCCACCCTTTACCAT
GGCCATGTCTTTTTTGGTGCCACTCTCCAACGGAGAGCCCATCGACCGAA
TCCGGCAGCGCATTCTTGATAGCTACCTATCTATATTGGTCCGCAACTAT
ATGCTCTGGCCGGCCGCACAGATGCTAAACTTCAGATTCGTGCCGCTGGG
CTACCAGGTGCTCTACGCCCAGTTCATCGCCCTCGTATGGAACTGCTACC
TCTCCATGATACTTAATAGCTAGAAGCTTTCTAGACCAT
BS12383.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 15:42:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11077-RA | 507 | CG11077-PA | 1..507 | 17..523 | 2535 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:42:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11077-RA | 687 | CG11077-RA | 113..619 | 17..523 | 2535 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 15:42:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 4 | 1348131 | 4 | 1028743..1029249 | 523..17 | 2535 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 15:42:12 has no hits.
BS12383.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:44:52 Download gff for
BS12383.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11077-RA | 1..507 | 17..523 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:19:34 Download gff for
BS12383.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11077-RA | 108..620 | 10..527 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:52:13 Download gff for
BS12383.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11077-RA | 113..619 | 17..523 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:44:53 Download gff for
BS12383.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11077-RA | 108..620 | 10..527 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:14:23 Download gff for
BS12383.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11077-RA | 113..619 | 17..523 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 16:14:23 Download gff for
BS12383.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 4 | 1028743..1029249 | 17..523 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:52:13 Download gff for
BS12383.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_4 | 1049369..1049875 | 17..523 | 100 | | Minus |
BS12383.pep Sequence
Translation from 16 to 522
> BS12383.pep
MKRLKAYLKDGINVAAVMCLGDTISQFFFDKKSLDEWDAGRTLRFGIVGL
VFVGPTLRRWYHFLESRVPKTYSPMRRGVTKMLVDQTLFAPPFTMAMSFL
VPLSNGEPIDRIRQRILDSYLSILVRNYMLWPAAQMLNFRFVPLGYQVLY
AQFIALVWNCYLSMILNS*
BS12383.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:37:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11077-PA | 168 | CG11077-PA | 1..168 | 1..168 | 880 | 100 | Plus |
| CG2022-PB | 193 | CG2022-PB | 15..170 | 8..165 | 199 | 25.9 | Plus |
| CG5906-PA | 196 | CG5906-PA | 33..184 | 11..165 | 172 | 30.6 | Plus |
| CG14777-PF | 196 | CG14777-PF | 33..178 | 16..163 | 170 | 27 | Plus |
| CG14777-PC | 196 | CG14777-PC | 33..178 | 16..163 | 170 | 27 | Plus |
