BS12395.complete Sequence
779 bp assembled on 2006-11-01
GenBank Submission: FJ637158
> BS12395.complete
GAAGTTATCAGTCGACATGCGCCGCCTTCAAACGAGCCTTTATCGACTGC
TCCGTGCTCACCACACATCCAGCAGAATGCAGCACCAAGCGAGCGAGCTG
AGGACTCCAGTGTGCGCGGTGGGCGACGAGGCTGCTCTCCAGTTGGCCCG
CCAGTGCCTGCTTGGTGGCCAAGTGATTGCCCTGCCCACCGATACCGTGT
ATGGCCTGGCCTGCGATGCCAACAACGAGACAGCCATACAGCAGCTCTAC
GAGATTAAGGGTCGCGATGAACACAAGCCCGTGGCCATCTGCGTTCACAA
CATCGATGCGTTGCGACGCTTTGGTCAGGCTGCCCATCTCAGCGACGAGC
TGCTAACTCGTTTGCTCCCGGGCCCCCTGACCATCGTGATCGAGCGGACG
TCCCAGCTGAGCAACCGTTTCCTTAATCCCAGCACCTCCAAAATCGGCAT
ACGCATTCCGGACTTCAACTTCATGCGCGACCTGTGCGCCGTGTGGCAGG
AGAAGCCCCTGGCCCTGACCAGCGCCAATCGCTCCAGTGCGCCCAGCAGT
CTGCAGGTGTCCGAGTTCCGTTCCCTATGGCCCCAATTGGGCGCCGTCTT
CGATGCCGGTCGAATCGGTCTGACCGAGGAGCGACGACTGGCCTCCACGG
TCATTGACCTGGCCACTCCTGGCTACTATGAAATAGTGCGCGCCGGCGTG
GCTCTCAAGCCGACACTCAGCCTCATGGAGGAGTTCGGCATTCGGGAGCT
AAAAATGATGTAGAAGCTTTCTAGACCAT
BS12395.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:21:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33786-RA | 747 | CG33786-PA | 1..747 | 17..763 | 3735 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:21:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33785-RA | 1245 | CG33785-RA | 388..1134 | 17..763 | 3735 | 100 | Plus |
| CG33786-RA | 1245 | CG33786-RA | 388..1134 | 17..763 | 3735 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:21:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 20642577..20643323 | 763..17 | 3735 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 13:21:06 has no hits.
BS12395.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:44:59 Download gff for
BS12395.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33786-RA | 1..747 | 17..763 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:19:40 Download gff for
BS12395.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33785-RA | 377..1129 | 10..763 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 12:34:19 Download gff for
BS12395.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33785-RA | 388..1134 | 17..763 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:44:59 Download gff for
BS12395.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33785-RA | 377..1129 | 10..763 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:16:28 Download gff for
BS12395.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33786-RA | 388..1134 | 17..763 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:16:28 Download gff for
BS12395.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 20642577..20643323 | 17..763 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 12:34:19 Download gff for
BS12395.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 16530082..16530828 | 17..763 | 100 | | Minus |
BS12395.pep Sequence
Translation from 16 to 762
> BS12395.pep
MRRLQTSLYRLLRAHHTSSRMQHQASELRTPVCAVGDEAALQLARQCLLG
GQVIALPTDTVYGLACDANNETAIQQLYEIKGRDEHKPVAICVHNIDALR
RFGQAAHLSDELLTRLLPGPLTIVIERTSQLSNRFLNPSTSKIGIRIPDF
NFMRDLCAVWQEKPLALTSANRSSAPSSLQVSEFRSLWPQLGAVFDAGRI
GLTEERRLASTVIDLATPGYYEIVRAGVALKPTLSLMEEFGIRELKMM*
BS12395.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:37:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33786-PA | 248 | CG33786-PA | 1..248 | 1..248 | 1259 | 100 | Plus |
