BS12413.complete Sequence
473 bp assembled on 2006-11-01
GenBank Submission: FJ637163
> BS12413.complete
GAAGTTATCAGTCGACATGACGGCGACTGCGAGGCAGTCGGCAACATCGA
GAAAGCAACCTGCGATCGCAATGCTCAATGGAAACGCTTTTACGGTTAAG
CGGCTCTTAGCGCTGCTGATCATCTTCACAGTGGTGGACGCGAGTCGATC
CCTGGAGCTGGGCGACAAGTGCCAGCATGACATGGACTGCACGGATTTCA
TCAAGGGCAGCAGCTGCTCCGCCCTCGGATACTGCGAGTGCGCCCCCTAC
TTCGTCCAGTTGGATTCCAAGCGCTGTTTGTCATCCCAGCTCCTTGGCGG
CGACTGCCAGCTGAGCGAGCAGTGCTCCATGAAGGTGGCCAATAGCAGTT
GTCTGGAGGGTGCATGCCGCTGCGTCGAGGGATTCCTGCAGTTCCGCAAG
CACACCTGTCTGGGACGTAAGTATCAGCCGACCGCCGGCCAGCTATTGTG
GCCCTAAAAGCTTTCTAGACCAT
BS12413.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:52:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ImpE1-RB | 441 | CG32356-PB | 1..441 | 17..457 | 2205 | 100 | Plus |
| ImpE1-RC | 4851 | CG32356-PC | 1..400 | 17..416 | 2000 | 100 | Plus |
| ImpE1-RA | 4851 | CG32356-PA | 1..400 | 17..416 | 2000 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:52:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ImpE1-RB | 919 | CG32356-RB | 355..795 | 17..457 | 2205 | 100 | Plus |
| ImpE1-RC | 6099 | CG32356-RC | 411..810 | 17..416 | 2000 | 100 | Plus |
| ImpE1-RA | 6043 | CG32356-RA | 355..754 | 17..416 | 2000 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:52:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 8379144..8379316 | 112..284 | 865 | 100 | Plus |
| 3L | 28110227 | 3L | 8379854..8380026 | 285..457 | 865 | 100 | Plus |
| 3L | 28110227 | 3L | 8374976..8375071 | 17..112 | 480 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 00:52:47 has no hits.
BS12413.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:44:45 Download gff for
BS12413.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ImpE1-RB | 1..441 | 17..457 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 01:55:01 Download gff for
BS12413.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ImpE1-RB | 344..795 | 10..462 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:33:23 Download gff for
BS12413.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ImpE1-RB | 355..793 | 17..455 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:44:45 Download gff for
BS12413.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ImpE1-RB | 344..795 | 10..462 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:39:43 Download gff for
BS12413.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ImpE1-RB | 355..793 | 17..455 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:39:43 Download gff for
BS12413.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 8379145..8379316 | 113..284 | 100 | -> | Plus |
| 3L | 8379854..8380024 | 285..455 | 100 | | Plus |
| 3L | 8374976..8375071 | 17..112 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:33:23 Download gff for
BS12413.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 8372245..8372416 | 113..284 | 100 | -> | Plus |
| arm_3L | 8372954..8373124 | 285..455 | 100 | | Plus |
| arm_3L | 8368076..8368171 | 17..112 | 100 | -> | Plus |
BS12413.pep Sequence
Translation from 16 to 456
> BS12413.pep
MTATARQSATSRKQPAIAMLNGNAFTVKRLLALLIIFTVVDASRSLELGD
KCQHDMDCTDFIKGSSCSALGYCECAPYFVQLDSKRCLSSQLLGGDCQLS
EQCSMKVANSSCLEGACRCVEGFLQFRKHTCLGRKYQPTAGQLLWP*
BS12413.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:38:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ImpE1-PB | 146 | CG32356-PB | 1..146 | 1..146 | 775 | 100 | Plus |
| ImpE1-PC | 1616 | CG32356-PC | 1..133 | 1..133 | 700 | 100 | Plus |
| ImpE1-PA | 1616 | CG32356-PA | 1..133 | 1..133 | 700 | 100 | Plus |
