BS12415.complete Sequence
500 bp assembled on 2006-11-01
GenBank Submission: FJ637165
> BS12415.complete
GAAGTTATCAGTCGACATGTCGGCACTTGGGGATTCTGATGATGAAACTG
AGTTTAAAGAGATCAGCTCGACTAATTATCATCGTGTGCAGGAAAAGGTG
GCAAAGATAAGCTATGCAGATGGCGTTGCCGATGGCAGGGAAAAGGTCTT
CCAAGAGAGCTTCGATGAAGGCTTTGAGAATGGCTTTAAAACTGGATTCG
AACTGGCCAAACTGAGTGCCTTCTATGAAACCATAAGCAATGCGGCGGGA
GCTGAAAGCTCCGAATGGAATGCAGAACGAGAAGCTTATCAAAAACTCCA
ACTGGCAGATGCAACAAATAAAGCACACTTCACATATTTGGAGCATCAAG
GCGCTCCACTCAACGTTATATCCGAAAAACAAAAGACCTACGTGGACGAC
CTCCTAGGAAAACTGGCACAGCAACTCCCGGCAACTACGAATTTATTCAC
ATCGGGGAGCGATTCTAGTGTTAATGTGGTTTAAAAGCTTTCTAGACCAT
BS12415.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 21:02:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31142-RA | 468 | CG31142-PA | 1..468 | 17..484 | 2340 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:02:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31142-RA | 644 | CG31142-RA | 81..548 | 17..484 | 2340 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 21:02:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 23929512..23929892 | 104..484 | 1905 | 100 | Plus |
| 3R | 32079331 | 3R | 23929323..23929417 | 17..111 | 460 | 98.9 | Plus |
Blast to na_te.dros performed on 2014-11-27 21:02:19 has no hits.
BS12415.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:44:48 Download gff for
BS12415.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31142-RA | 1..468 | 17..484 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:19:28 Download gff for
BS12415.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31142-RA | 74..544 | 17..488 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:15:20 Download gff for
BS12415.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31142-RA | 81..546 | 17..482 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:44:48 Download gff for
BS12415.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31142-RA | 74..544 | 17..488 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 21:33:23 Download gff for
BS12415.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31142-RA | 81..546 | 17..482 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 21:33:23 Download gff for
BS12415.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 23929515..23929890 | 107..482 | 100 | | Plus |
| 3R | 23929323..23929412 | 17..106 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:15:20 Download gff for
BS12415.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 19755045..19755134 | 17..106 | 100 | -> | Plus |
| arm_3R | 19755237..19755612 | 107..482 | 100 | | Plus |
BS12415.pep Sequence
Translation from 16 to 483
> BS12415.pep
MSALGDSDDETEFKEISSTNYHRVQEKVAKISYADGVADGREKVFQESFD
EGFENGFKTGFELAKLSAFYETISNAAGAESSEWNAEREAYQKLQLADAT
NKAHFTYLEHQGAPLNVISEKQKTYVDDLLGKLAQQLPATTNLFTSGSDS
SVNVV*
BS12415.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:38:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31142-PA | 155 | CG31142-PA | 1..155 | 1..155 | 786 | 100 | Plus |
