BS12417.complete Sequence
758 bp assembled on 2006-11-01
GenBank Submission: FJ637167
> BS12417.complete
GAAGTTATCAGTCGACATGGATCAACTGGTGCAGTTGAACAATCAGGCTG
GCGGACGGGACAAAATCGCCCGACTTATTCAGTATGCCTCGCGTGCAATG
TGGGACTCGCTGGAGTCCGCCAATTCCAATCCAGCGCTTGTGGACAACTT
CAAGACGGTTGAATACATCCTGAGCACATTCCGAAAATTACTCCGCTTTG
GTAAGTGCGTTGATGTATTCTACGGCGCTCTGAAGACCATTCACCATCCG
GATCTTAACATCCGTGTGACGCTCACCTTAAGCAAGCTGTCACAATCGCT
GTTCCTCTTCGCCGATCACTTCCTCTGGCTGGCCAGGACGGGACTGACGG
CGGTGAACGCCAAGCGCTGGTCCAACATCGCCAATAAGTACTGGCTCTTC
TCGATCATAATGAACTTGTGCCGGGACTTCTACGAGATCCTGAGAGTACT
GGACCTGCATCGATCCGGTAGCAAGAGCGGCATTTCGCGCTGCCGCATCC
CCGCGAGCATCAACTCGCCGGAGGACTTTAAGCGCCTTGCCCTGCAGTCC
TACGTGCTGATGCAGGGACACAAAGACATAGTTGTGGACACGGTGAAGAA
TGCGTGCGACTTCTTCATTCCGCTGACGGCTCTGGGTTACACAAGTCTCA
CGCCCCGGACAATTGGACTCCTGGGGGCAATTTCATCGCTGGCTGGACTC
TGGGCTCTGCTGGAACCGAGGGCCAAGCTAACGCCTGCATAAAAGCTTTC
TAGACCAT
BS12417.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:41:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Pex11-RA | 726 | CG8315-PA | 1..726 | 17..742 | 3630 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:41:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Pex11-RA | 956 | CG8315-RA | 104..829 | 17..742 | 3630 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:41:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 15991494..15992047 | 742..189 | 2770 | 100 | Minus |
| 2R | 25286936 | 2R | 15992101..15992272 | 188..17 | 860 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 07:41:41 has no hits.
BS12417.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:30:26 Download gff for
BS12417.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8315-RA | 1..726 | 17..742 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 01:54:01 Download gff for
BS12417.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8315-RA | 73..810 | 9..747 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:25:33 Download gff for
BS12417.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pex11-RA | 104..827 | 17..740 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:30:26 Download gff for
BS12417.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8315-RA | 73..810 | 9..747 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:02:57 Download gff for
BS12417.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pex11-RA | 104..827 | 17..740 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:02:57 Download gff for
BS12417.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 15991496..15992047 | 189..740 | 100 | <- | Minus |
| 2R | 15992101..15992272 | 17..188 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:25:33 Download gff for
BS12417.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 11879001..11879552 | 189..740 | 100 | <- | Minus |
| arm_2R | 11879606..11879777 | 17..188 | 100 | | Minus |
BS12417.pep Sequence
Translation from 16 to 741
> BS12417.pep
MDQLVQLNNQAGGRDKIARLIQYASRAMWDSLESANSNPALVDNFKTVEY
ILSTFRKLLRFGKCVDVFYGALKTIHHPDLNIRVTLTLSKLSQSLFLFAD
HFLWLARTGLTAVNAKRWSNIANKYWLFSIIMNLCRDFYEILRVLDLHRS
GSKSGISRCRIPASINSPEDFKRLALQSYVLMQGHKDIVVDTVKNACDFF
IPLTALGYTSLTPRTIGLLGAISSLAGLWALLEPRAKLTPA*
BS12417.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:26:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Pex11-PA | 241 | CG8315-PA | 1..241 | 1..241 | 1240 | 100 | Plus |
