BS12424.complete Sequence
461 bp assembled on 2006-11-01
GenBank Submission: FJ637171
> BS12424.complete
GAAGTTATCAGTCGACATGAAACTACTGATTGCTCTGTTTGCACTGGTGA
CCGCTGTGAACGCTCAGAATGGATTCGGCCAAGTTGGACAAGGAGGATAT
GGAGGGCAAGGAGGATTTGGAGGATTCGGAGGAATCGGCGGGCAAGCAGG
TTTTGGTGGACAAATAGGATTCACTGGACAGGGTGGAGTTGGTGGCCAGG
TGGGAATTGGTCAAGGCGGAGTCCACCCGGGTCAAGGAGGATTCGCTGGA
CAAGGTTCTCCAAACCAATATCAGCCTGGTTACGGAAGTCCTGTGGGATC
TGGCCATTTCCATGGAACTAATCCAGTTGAGTCCGGTCATTTTCACGAAA
ATCCTCATGAATATCCGGAACATCATGGCGATCATCACCGTGAACATCAT
GAGCACCATGGACACCACGAACATCATGGACATCATAGACATTAGAAGCT
TTCTAGACCAT
BS12424.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:03:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
sala-RC | 429 | CG4922-PC | 1..429 | 17..445 | 2145 | 100 | Plus |
sala-RA | 429 | CG4922-PA | 1..429 | 17..445 | 2145 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:03:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43355-RC | 1697 | CG43355-RC | 1028..1456 | 17..445 | 2145 | 100 | Plus |
sala-RC | 1697 | CG4922-RC | 1028..1456 | 17..445 | 2145 | 100 | Plus |
sala-RA | 698 | CG4922-RA | 29..457 | 17..445 | 2145 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:03:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 11486284..11486708 | 21..445 | 2095 | 99.5 | Plus |
Blast to na_te.dros performed 2014-11-27 14:03:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
springer | 7546 | springer SPRINGER 7546bp Derived from BACR06P08 by Sue Celniker, 29 March 2001. | 2429..2451 | 12..34 | 106 | 95.7 | Plus |
BS12424.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:47:22 Download gff for
BS12424.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
sala-RA | 1..429 | 17..445 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:35:17 Download gff for
BS12424.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
sala-RA | 13..450 | 8..445 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:32:28 Download gff for
BS12424.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
sala-RA | 29..457 | 17..445 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:47:22 Download gff for
BS12424.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
sala-RA | 13..450 | 8..445 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:02:21 Download gff for
BS12424.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
sala-RA | 29..457 | 17..445 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:02:21 Download gff for
BS12424.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 11486282..11486708 | 17..445 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:32:28 Download gff for
BS12424.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 11486282..11486708 | 17..445 | 99 | | Plus |
BS12424.pep Sequence
Translation from 16 to 444
> BS12424.pep
MKLLIALFALVTAVNAQNGFGQVGQGGYGGQGGFGGFGGIGGQAGFGGQI
GFTGQGGVGGQVGIGQGGVHPGQGGFAGQGSPNQYQPGYGSPVGSGHFHG
TNPVESGHFHENPHEYPEHHGDHHREHHEHHGHHEHHGHHRH*
BS12424.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:26:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
sala-PC | 142 | CG4922-PC | 1..142 | 1..142 | 826 | 100 | Plus |
sala-PA | 142 | CG4922-PA | 1..142 | 1..142 | 826 | 100 | Plus |
CG8157-PB | 113 | CG8157-PB | 1..111 | 1..138 | 238 | 48.2 | Plus |
CG8157-PA | 113 | CG8157-PA | 1..111 | 1..138 | 238 | 48.2 | Plus |
CG7299-PC | 177 | CG7299-PC | 68..131 | 17..83 | 203 | 61.2 | Plus |