Clone BS12426 Report

Search the DGRC for BS12426

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:124
Well:26
Vector:pDNR-Dual
Associated Gene/TranscriptCG14598-RA
Protein status:BS12426.pep: full length peptide match
Sequenced Size:16

Clone Sequence Records

BS12426.complete Sequence

722 bp assembled on 2006-11-01

GenBank Submission: FJ637172

> BS12426.complete
GAAGTTATCAGTCGACATGTCACTGAAATACTTACTCATTGCTTGTGCAG
TGCTGATCGGATTGTGTGGAGCTGATGTGTCAGAAATAAAGGCGGTTAAA
GTGGATCTGCCTTTCAATGACTTGCTACCACCGCTGCTGGATGAAGTGAG
CACCACGACGACAACGACGACGACAACGACAACCACAACGACGACCACAA
CGGAGAAGCCAGCCACAACGCTGGCCACAAAGCCAACCAAGAAATCGTAC
TACCAGAAGCCAGCTCAGCTGGCAAAGGAGGATAAGTTGAAGACCATTGT
CATCAAGCAGGATGTTTCACAGCTCCCTTTGGATCTACTGCCACCTTTCG
AAGACGAGGTCAAGCCGGCGGAGGACAAGCTGCGGCCAGTGGTTAATACT
ACGCCAAAACCCGTGGTTAGGATCTCTCAGCCGTCTGTGCTCAAGGTCAC
TCCAAAGGCTGTTCCCAAGGTCACCCCGCCGCCTGCTCCACGTCCGCAGT
ACTCTGTTCAACCAGCCCTAGCATCCCGCCCACAATACTCCGTTCATCCT
GCTCCTCAAGCGATACACCCTCAGCCCACCCGTGCTTCTGGTTTCGGAAG
TGGATTCCAGTCCCGTTTCTCAAACTACTTCCTCACCAGTACCCCTCGAC
CCAGACGCGGTCCCCTGCCCACTATCACCCCTTTTCCACGCTTCGTCAGA
CTGTAGAAGCTTTCTAGACCAT

BS12426.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:59:14
Subject Length Description Subject Range Query Range Score Percent Strand
CG14598-RA 690 CG14598-PA 1..690 17..706 3450 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:59:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG14598-RA 1230 CG14598-RA 88..777 17..706 3450 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:59:12
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 7440849..7441523 32..706 3375 100 Plus
Blast to na_te.dros performed on 2014-11-27 13:59:13 has no hits.

BS12426.complete Sim4 Records

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:44:35 Download gff for BS12426.complete
Subject Subject Range Query Range Percent Splice Strand
CG14598-RA 1..690 17..706 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:19:15 Download gff for BS12426.complete
Subject Subject Range Query Range Percent Splice Strand
CG14598-RA 75..771 10..706 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:30:31 Download gff for BS12426.complete
Subject Subject Range Query Range Percent Splice Strand
CG14598-RA 88..777 17..706 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:44:36 Download gff for BS12426.complete
Subject Subject Range Query Range Percent Splice Strand
CG14598-RA 75..771 10..706 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:00:48 Download gff for BS12426.complete
Subject Subject Range Query Range Percent Splice Strand
CG14598-RA 88..777 17..706 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:00:48 Download gff for BS12426.complete
Subject Subject Range Query Range Percent Splice Strand
3R 7440849..7441523 32..706 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:30:31 Download gff for BS12426.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 3266571..3267245 32..706 100   Plus

BS12426.pep Sequence

Translation from 16 to 705

> BS12426.pep
MSLKYLLIACAVLIGLCGADVSEIKAVKVDLPFNDLLPPLLDEVSTTTTT
TTTTTTTTTTTTEKPATTLATKPTKKSYYQKPAQLAKEDKLKTIVIKQDV
SQLPLDLLPPFEDEVKPAEDKLRPVVNTTPKPVVRISQPSVLKVTPKAVP
KVTPPPAPRPQYSVQPALASRPQYSVHPAPQAIHPQPTRASGFGSGFQSR
FSNYFLTSTPRPRRGPLPTITPFPRFVRL*

BS12426.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:38:27
Subject Length Description Subject Range Query Range Score Percent Strand
CG14598-PA 229 CG14598-PA 1..229 1..229 1182 100 Plus