BS12427.complete Sequence
443 bp assembled on 2006-11-01
GenBank Submission: FJ637173
> BS12427.complete
GAAGTTATCAGTCGACATGAAGTTGGCTAAGAAGTGCTCCACCTACTTGG
TGATATGCCTGGTACTGTTGGCCTGCTGCCTGCAAGAATCGGAGGCCACG
CGACGTGTGAACCGCGGACGACGCACCCTTACCCGCAGATACTTCACTGG
CCTTGCTATTCCCGGATGGGCTCTCATCGTTTGTGTAGCGGTAGGTGAGC
TGCTGATTGGTGGAGCCCTCTACTTCATCCTCAAGAAGGTGATCCTGGAC
AAGGAACCAGATCAGACGGCGGCCTCCTACACGCCCGCCCAGACTCATGC
GACGGCCACACCTTATACTCCCGCCCAGACTCACGATCCGGCCACGGCCA
CAACCTATACTCCTGCCCAGACTCATGAGACGGCCAATGTGACTCCCACT
CCAACGCATGCCACCGCTATTGTCTGAAAGCTTTCTAGACCAT
BS12427.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:46:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13704-RA | 411 | CG13704-PA | 1..411 | 17..427 | 2055 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:46:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13704-RA | 682 | CG13704-RA | 98..508 | 17..427 | 2055 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:46:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 4900415..4900695 | 147..427 | 1405 | 100 | Plus |
3L | 28110227 | 3L | 4900276..4900360 | 62..146 | 425 | 100 | Plus |
3L | 28110227 | 3L | 4898997..4899042 | 17..62 | 230 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:46:18 has no hits.
BS12427.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:44:37 Download gff for
BS12427.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13704-RA | 1..411 | 17..427 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:19:16 Download gff for
BS12427.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13704-RA | 95..508 | 14..427 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:44:06 Download gff for
BS12427.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13704-RA | 98..507 | 17..426 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:44:37 Download gff for
BS12427.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13704-RA | 95..508 | 14..427 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:03:18 Download gff for
BS12427.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13704-RA | 98..507 | 17..426 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:03:18 Download gff for
BS12427.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 4898997..4899042 | 17..62 | 100 | -> | Plus |
3L | 4900277..4900360 | 63..146 | 100 | -> | Plus |
3L | 4900415..4900694 | 147..426 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:44:06 Download gff for
BS12427.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 4900415..4900694 | 147..426 | 100 | | Plus |
arm_3L | 4898997..4899042 | 17..62 | 100 | -> | Plus |
arm_3L | 4900277..4900360 | 63..146 | 100 | -> | Plus |
BS12427.pep Sequence
Translation from 16 to 426
> BS12427.pep
MKLAKKCSTYLVICLVLLACCLQESEATRRVNRGRRTLTRRYFTGLAIPG
WALIVCVAVGELLIGGALYFILKKVILDKEPDQTAASYTPAQTHATATPY
TPAQTHDPATATTYTPAQTHETANVTPTPTHATAIV*
BS12427.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:38:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13704-PA | 136 | CG13704-PA | 1..136 | 1..136 | 709 | 100 | Plus |