BS12431.complete Sequence
731 bp assembled on 2006-11-01
> BS12431.complete
GAAGTTATCAGTCGACATGGTATCAAATAGCACTTATGCTTTGGGTCTCC
TTTGCATTTTGGTTTTTCTACAAGGAAGTACACCGATCCTAGCCCAGAGT
AATGATTATGTGGCCCTATGTAACTTGACCGATAGCATTGCGGTCGATCT
TGATCTGTTCTCTGGAATTTGGTGGGAAGTGGCTCGTCAGCCGTCCGGCA
TTGATTTTTGCACTGAGGTGAATATTACGGTGCTGAATAAAACCGAGGAT
AATGTGCTGATCGATACCACATATGCCGTATCTCCCGATTACCCGTGGGT
GAATCAAACCATGAACGCAACCATCACTGTGGAGAATAACACGGCGGCCG
CGGATGGCTACAACTTCACCTACTGGAACCCACCTGGTTATACCACCTAT
ACAGTGTACAAGGTCCTTTACACTGACTACACCGATGTGGCCTTCCTTTG
TGGCTATACCAACAAGACGGATAACGGCACATCCTTTGGAATTATCCTTG
CTAGGGATCGTACCCCCACCACACAAATTTTGAATAAACTCGAGGGTCTT
GGCTCTAGTATATCTTCAAACTTTTTAAATGGCACCATGTCAGCGATAAC
TCAGGGCGAATCTTGCTATGCACCATCCGGATCCAATCCTTCGACCATTA
TTTCCACAATGTTGATTGCCATGGCTATTATTCTTGGCATTTTTGCTGAC
CATCAAATAAATTAGAAGCTTTCTAGACCAT
BS12431.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:19:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31446-RA | 699 | CG31446-PA | 1..699 | 17..715 | 3495 | 100 | Plus |
CG31446-RB | 714 | CG31446-PB | 1..714 | 17..715 | 3310 | 97.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:19:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31446-RA | 869 | CG31446-RA | 45..744 | 17..716 | 3500 | 100 | Plus |
CG31446-RB | 884 | CG31446-RB | 45..759 | 17..716 | 3315 | 97.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:19:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 15693328..15693783 | 157..612 | 2280 | 100 | Plus |
3R | 32079331 | 3R | 15693130..15693270 | 17..157 | 705 | 100 | Plus |
3R | 32079331 | 3R | 15693966..15694069 | 613..716 | 520 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:19:20 has no hits.
BS12431.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:44:40 Download gff for
BS12431.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31446-RA | 1..699 | 17..715 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 01:54:59 Download gff for
BS12431.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31446-RA | 37..749 | 8..724 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:51:21 Download gff for
BS12431.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31446-RA | 45..743 | 17..715 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:44:41 Download gff for
BS12431.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31446-RA | 37..749 | 8..724 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:10:56 Download gff for
BS12431.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31446-RA | 45..743 | 17..715 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:10:56 Download gff for
BS12431.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 15693130..15693270 | 17..157 | 100 | -> | Plus |
3R | 15693329..15693783 | 158..612 | 100 | -> | Plus |
3R | 15693966..15694068 | 613..715 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:51:21 Download gff for
BS12431.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 11518852..11518992 | 17..157 | 100 | -> | Plus |
arm_3R | 11519051..11519505 | 158..612 | 100 | -> | Plus |
arm_3R | 11519688..11519790 | 613..715 | 100 | | Plus |
BS12431.pep Sequence
Translation from 16 to 714
> BS12431.pep
MVSNSTYALGLLCILVFLQGSTPILAQSNDYVALCNLTDSIAVDLDLFSG
IWWEVARQPSGIDFCTEVNITVLNKTEDNVLIDTTYAVSPDYPWVNQTMN
ATITVENNTAAADGYNFTYWNPPGYTTYTVYKVLYTDYTDVAFLCGYTNK
TDNGTSFGIILARDRTPTTQILNKLEGLGSSISSNFLNGTMSAITQGESC
YAPSGSNPSTIISTMLIAMAIILGIFADHQIN*
BS12431.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 01:05:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31446-PA | 232 | CG31446-PA | 1..232 | 1..232 | 1216 | 100 | Plus |
CG31446-PB | 237 | CG31446-PB | 1..237 | 1..232 | 1200 | 97.9 | Plus |
CG5399-PB | 218 | CG5399-PB | 5..215 | 8..223 | 161 | 30.9 | Plus |
CG5399-PA | 218 | CG5399-PA | 5..215 | 8..223 | 161 | 30.9 | Plus |