BS12433.complete Sequence
428 bp assembled on 2007-10-17
GenBank Submission: FJ637177
> BS12433.complete
GAAGTTATCAGTCGACATGTTCAAATTTATCGGCGTCATCGCTCTCCTGG
TCGCCACCGCCAGTGCTGGTCTCATCGAGACTCACCATGTGGTGCACGAG
CCCGTTCTGGCCAAGGTTGGATCGGTGGTGCACTCTGCTCCCTCGGCGGT
TTCCCACCAGAGCATCACCCAGGTGCACAGCAAGGCGGTGGTGCAGCCAG
TGGTTGCTCCTATCGTGAAGACCACCACCTACTCCCATCCCGCCGTTGCC
GTCCATGCTGCTCCAGTGGTTCACTCCGTGCCCGTTGTCCACGCCGCTCC
TGTCGTCCACTCCGTTCACTCCGCTCCTGTGGTGCACTCGGTGCTTCACT
CCGCTCCCCTCGTCAAGTCAGTGGTGCACTCCGCTCCTCTGGCCTACACC
CTGCACCACTAAAAGCTTTCTAGACCAT
BS12433.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 17:00:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13060-RA | 396 | CG13060-PA | 1..396 | 17..412 | 1980 | 100 | Plus |
CG13041-RA | 375 | CG13041-PA | 1..375 | 17..412 | 1385 | 91.2 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:00:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13060-RA | 539 | CG13060-RA | 71..467 | 17..413 | 1985 | 100 | Plus |
CG13041-RA | 513 | CG13041-RA | 68..442 | 17..412 | 1385 | 91.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 17:00:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 16319998..16320382 | 29..413 | 1925 | 100 | Plus |
3L | 28110227 | 3L | 16319025..16319381 | 412..35 | 1355 | 91.8 | Minus |
Blast to na_te.dros performed on 2014-11-27 17:00:51 has no hits.
BS12433.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:14:57 Download gff for
BS12433.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13060-RA | 1..396 | 17..412 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:45:49 Download gff for
BS12433.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13060-RA | 58..468 | 7..420 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:02:10 Download gff for
BS12433.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13060-RA | 76..464 | 22..410 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 16:38:39 Download gff for
BS12433.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13060-RA | 71..459 | 22..410 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:32:25 Download gff for
BS12433.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13060-RA | 76..464 | 22..410 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:32:25 Download gff for
BS12433.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 16319998..16320379 | 29..410 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:02:10 Download gff for
BS12433.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 16313098..16313479 | 29..410 | 100 | | Plus |
BS12433.pep Sequence
Translation from 16 to 411
> BS12433.pep
MFKFIGVIALLVATASAGLIETHHVVHEPVLAKVGSVVHSAPSAVSHQSI
TQVHSKAVVQPVVAPIVKTTTYSHPAVAVHAAPVVHSVPVVHAAPVVHSV
HSAPVVHSVLHSAPLVKSVVHSAPLAYTLHH*
BS12433.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:31:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13060-PA | 131 | CG13060-PA | 1..131 | 1..131 | 659 | 100 | Plus |
CG13041-PA | 124 | CG13041-PA | 1..124 | 1..131 | 584 | 90.8 | Plus |
CG13044-PA | 155 | CG13044-PA | 1..150 | 1..127 | 261 | 47.3 | Plus |
CG13040-PB | 185 | CG13040-PB | 1..144 | 1..131 | 249 | 45.9 | Plus |
CG13040-PA | 185 | CG13040-PA | 1..144 | 1..131 | 249 | 45.9 | Plus |