BS12435.complete Sequence
443 bp assembled on 2006-11-01
GenBank Submission: FJ637179
> BS12435.complete
GAAGTTATCAGTCGACATGAACGCCAGCCTCATCTATGAGATACTTATGT
ATCTGAACTCGTTCTACTTTGGCATGTACGCCGCCTTCGAAGTGGGCGTG
GGCGTTCTTAAGGCGATTAATCTAAACTACGGCGAGAACGCGTTGTCCCG
GGAGGCCAGCATCCTGCTCTCACTGTGCATCATCGAGACCGTGCGCATTG
TCTTCGGGCGGAAGAGCAGTCTAAGCGATCGTGGCTGGCAAGCAACCGCA
TCCGTAATATTAACACTGCCCAGTCTTGCTATTGTTATCTACTTGTGTTG
TTTTCAAACCTTTGTTCTCAAACTCGAAATTATTCTGAGTGCCTTAATGA
TCACCCTACAAGGTGCTGAACTAGTCTACGCCAGCATATTCATTTGTACA
ATGTGTCGCCCCGTCACATACACCTAGAAGCTTTCTAGACCAT
BS12435.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:59:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8116-RC | 411 | CG8116-PC | 1..411 | 17..427 | 2055 | 100 | Plus |
CG8116-RB | 411 | CG8116-PB | 1..411 | 17..427 | 2055 | 100 | Plus |
CG8116-RA | 411 | CG8116-PA | 1..411 | 17..427 | 2055 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:59:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8116-RC | 1826 | CG8116-RC | 550..961 | 16..427 | 2060 | 100 | Plus |
CG8116-RB | 2812 | CG8116-RB | 555..966 | 16..427 | 2060 | 100 | Plus |
CG8116-RA | 1831 | CG8116-RA | 555..966 | 16..427 | 2060 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 10:59:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 8717124..8717342 | 16..234 | 1095 | 100 | Plus |
3R | 32079331 | 3R | 8717848..8718042 | 233..427 | 975 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 10:59:17 has no hits.
BS12435.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:23:10 Download gff for
BS12435.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8116-RA | 1..411 | 17..427 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:30:43 Download gff for
BS12435.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8116-RA | 564..984 | 16..437 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:43:40 Download gff for
BS12435.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8116-RA | 556..966 | 17..427 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:23:10 Download gff for
BS12435.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8116-RA | 564..984 | 16..437 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:35:55 Download gff for
BS12435.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8116-RA | 556..966 | 17..427 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:35:55 Download gff for
BS12435.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 8717125..8717341 | 17..233 | 100 | -> | Plus |
3R | 8717849..8718042 | 234..427 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:43:40 Download gff for
BS12435.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 4542847..4543063 | 17..233 | 100 | -> | Plus |
arm_3R | 4543571..4543764 | 234..427 | 100 | | Plus |
BS12435.pep Sequence
Translation from 16 to 426
> BS12435.pep
MNASLIYEILMYLNSFYFGMYAAFEVGVGVLKAINLNYGENALSREASIL
LSLCIIETVRIVFGRKSSLSDRGWQATASVILTLPSLAIVIYLCCFQTFV
LKLEIILSALMITLQGAELVYASIFICTMCRPVTYT*
BS12435.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 20:41:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8116-PC | 136 | CG8116-PC | 1..136 | 1..136 | 677 | 100 | Plus |
CG8116-PB | 136 | CG8116-PB | 1..136 | 1..136 | 677 | 100 | Plus |
CG8116-PA | 136 | CG8116-PA | 1..136 | 1..136 | 677 | 100 | Plus |
CG11760-PB | 149 | CG11760-PB | 15..148 | 2..135 | 346 | 48.5 | Plus |