BS12438.complete Sequence
941 bp assembled on 2009-02-12
> BS12438.complete
GAAGTTATCAGTCGACATGCTGAAGTCAACGATTGTTGATCCGCGGGTGC
GCCTTGTGCCGTCAAAGAAGCTGCTTGACTTTCTGGACGCCCAAAAGAAG
CACTTAAAGGAGTTGCCCGAAAATGTGGCCAAGATTATGAAGCAAAGAGG
CCACACACTGCCCACCTCTATTAGGATTATCAAGGATGCGGGCTTGGAGT
ACAAACGACCAAAACTCAATTACGAGCTGTTGACAAAACTAACTGAAAAC
CTAGCCGACAAACCAGAAGAACCTGCTAAGGATAAATCGGAACCAGATTC
AGGGGTCAAGGATAGTGATGACGCAAAGTCAACAAGGGAGGTTAAACATT
TCCTATACTTAACCGACCTGCACTGGCTCTCAAAAACACTGGCTGAACTG
CGTCGTCAGGATCACTGCCAAGTCTTTCTGCATCAGCTAATTGAGTCCTG
TGATCTGCTCCTGCCCGAAAACGAAATGAAGCCGCGCAATCCTGAGCTAG
AAGCGCGCTGCCAACGTCTTCGCGCAGAGCAACAAAATCGGGATTACCTC
AAAATGACCAAGAATGTGGATGCCGGCTTAAAACACTATCCAGAGGACAC
TATCAGCTATCAGATTAAGAGCCTTAACAAGCAAATCATTGCCGTGGTGC
AGTTCATCTTCTCCGTGGCCGCTGGCTTTACGTTCGGCTTTTTCGGCGTC
AATTTGATGGTGGGCCCGCTGCCTTTCGGCTTTCGCATCTTGCTGGGCGT
GATTGTAGCGCTCATCATAGCCCTGGCTGAGATGTACTTCCTGGCCAAGA
AGCTGCACGAGTACGATGAGGTCTTGGACGCGCCCAAACGTAAGCCGCAG
CCATCGACGCCGGCTAAGCGCACCCCGCCCGCCGAGGGAAGTCAAGTCCA
GACATTGAAACCCCATGTTGACTAGAAGCTTTCTAGACCAT
BS12438.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:49:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7071-RC | 909 | CG7071-PC | 1..909 | 17..925 | 4545 | 100 | Plus |
CG7071-RB | 909 | CG7071-PB | 1..909 | 17..925 | 4545 | 100 | Plus |
CG7071-RA | 909 | CG7071-PA | 1..909 | 17..925 | 4545 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:49:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7071-RC | 1766 | CG7071-RC | 785..1694 | 17..926 | 4550 | 100 | Plus |
CG7071-RB | 1551 | CG7071-RB | 570..1479 | 17..926 | 4550 | 100 | Plus |
CG7071-RA | 1489 | CG7071-RA | 508..1417 | 17..926 | 4550 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 01:49:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 22363530..22364132 | 17..619 | 3000 | 99.8 | Plus |
3R | 32079331 | 3R | 22364197..22364508 | 615..926 | 1560 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 01:49:28 has no hits.
BS12438.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-02-12 18:08:31 Download gff for
BS12438.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34131-RA | 508..1416 | 17..925 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:02:45 Download gff for
BS12438.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
muted-RA | 508..1416 | 17..925 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:32:28 Download gff for
BS12438.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7071-RA | 508..1416 | 17..925 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:32:28 Download gff for
BS12438.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 22363530..22364127 | 17..614 | 100 | -> | Plus |
3R | 22364197..22364507 | 615..925 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:02:45 Download gff for
BS12438.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 18189252..18189849 | 17..614 | 100 | -> | Plus |
arm_3R | 18189919..18190229 | 615..925 | 100 | | Plus |
BS12438.pep Sequence
Translation from 16 to 924
> BS12438.pep
MLKSTIVDPRVRLVPSKKLLDFLDAQKKHLKELPENVAKIMKQRGHTLPT
SIRIIKDAGLEYKRPKLNYELLTKLTENLADKPEEPAKDKSEPDSGVKDS
DDAKSTREVKHFLYLTDLHWLSKTLAELRRQDHCQVFLHQLIESCDLLLP
ENEMKPRNPELEARCQRLRAEQQNRDYLKMTKNVDAGLKHYPEDTISYQI
KSLNKQIIAVVQFIFSVAAGFTFGFFGVNLMVGPLPFGFRILLGVIVALI
IALAEMYFLAKKLHEYDEVLDAPKRKPQPSTPAKRTPPAEGSQVQTLKPH
VD*
BS12438.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:58:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7071-PC | 302 | CG7071-PC | 1..302 | 1..302 | 1557 | 100 | Plus |
CG7071-PB | 302 | CG7071-PB | 1..302 | 1..302 | 1557 | 100 | Plus |
CG7071-PA | 302 | CG7071-PA | 1..302 | 1..302 | 1557 | 100 | Plus |