BS12445.complete Sequence
524 bp assembled on 2006-11-01
GenBank Submission: FJ637183
> BS12445.complete
GAAGTTATCAGTCGACATGTCCAAGTTTAGCCTCATCCTGTTGTCCGCCC
TGCTGGGCTGTCTTGTGTCCGGTGGAGCGGCTGGAACAATACGTGTGGAT
ACCACCGGCATCCAAGTGGTGGATAATATCCATGTCTTTGCCGCCCAATA
CCCGGGTCTGCAGATCCAGCAGATGGAGAAGGAAATTGTGCCGGCCAAGG
CCCGCGTCGGAAGCCAGACCGTGCGCTACAACATGGGAGCCCGCATTCCG
GGCGACGAACTGGTGGCCCAGACAGCCAACACTTACGAATTCCCACGGGC
GCAAGATGTGAGCCTGCAGCTTACCTATCCGGAGAACGGCAAGGGTGCCA
CTGTATCCTACGTGGAGCTGCTCTGCACCCAGGACACCAACGAGGGCACC
GCCTACGTGGTCGCCGGAGGCATCGGCCAGAGCTTGATCTCCATCGTGCT
GGAGGCCAAGAACACCAAGAACTTCTCATACCAGGCTCTCTACTACGGAG
TCAACTAGAAGCTTTCTAGACCAT
BS12445.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 11:00:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15043-RB | 492 | CG15043-PB | 1..492 | 17..508 | 2460 | 100 | Plus |
| CG15043-RA | 492 | CG15043-PA | 1..492 | 17..508 | 2460 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:00:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15043-RB | 903 | CG15043-RB | 87..578 | 17..508 | 2460 | 100 | Plus |
| CG15043-RA | 694 | CG15043-RA | 87..578 | 17..508 | 2460 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 11:00:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 18493518..18493775 | 508..251 | 1290 | 100 | Minus |
| X | 23542271 | X | 18493847..18494082 | 252..17 | 1180 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 11:00:28 has no hits.
BS12445.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:44:27 Download gff for
BS12445.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15043-RA | 1..492 | 17..508 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:19:05 Download gff for
BS12445.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15043-RA | 83..582 | 17..515 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:23:03 Download gff for
BS12445.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15043-RA | 87..578 | 17..508 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:44:28 Download gff for
BS12445.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15043-RA | 83..582 | 17..515 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:36:27 Download gff for
BS12445.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15043-RA | 87..578 | 17..508 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:36:27 Download gff for
BS12445.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 18493518..18493774 | 252..508 | 100 | <- | Minus |
| X | 18493848..18494082 | 17..251 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:23:03 Download gff for
BS12445.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 18387551..18387807 | 252..508 | 100 | <- | Minus |
| arm_X | 18387881..18388115 | 17..251 | 100 | | Minus |
BS12445.pep Sequence
Translation from 16 to 507
> BS12445.pep
MSKFSLILLSALLGCLVSGGAAGTIRVDTTGIQVVDNIHVFAAQYPGLQI
QQMEKEIVPAKARVGSQTVRYNMGARIPGDELVAQTANTYEFPRAQDVSL
QLTYPENGKGATVSYVELLCTQDTNEGTAYVVAGGIGQSLISIVLEAKNT
KNFSYQALYYGVN*
BS12445.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:38:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15043-PB | 163 | CG15043-PB | 1..163 | 1..163 | 820 | 100 | Plus |
| CG15043-PA | 163 | CG15043-PA | 1..163 | 1..163 | 820 | 100 | Plus |
| CG15044-PA | 160 | CG15044-PA | 7..159 | 7..161 | 153 | 25.8 | Plus |
