BS12446.complete Sequence
413 bp assembled on 2006-11-01
GenBank Submission: FJ637184
> BS12446.complete
GAAGTTATCAGTCGACATGGCACAAATGGACATCGAATTGAAGAAGGCCT
TCACCGAGATGCAGATCAATAAGCTGGAGACGACCAAGAAGATCCACATG
ATCGACATGAAGTGCGACATGGTCAAGACAGGCAAACAAAAGTACCAGCT
GACAGAAAAGGGCACCAGCAGCTTGGCCGACGACACAAGAGTTTACCAGT
CCGTGGGTCGCATGTTCCTGCTTACCGATGTACAGAATATGCGCGAGGAC
CTGAAGGCTAGGCAGGAGAAATGCGACAAAGCGATAGAACTGCTGGAGAA
GAAGAAGGAGTTCTTGCAGAAGTCCCTTAAGAGCCAGGAAGACGGTCTGC
GCGAGTTGGTGCAGCAGCGCAAGGAAGCCGATCAGACTGCGAAATAGAAG
CTTTCTAGACCAT
BS12446.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:46:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13993-RB | 381 | CG13993-PB | 1..381 | 17..397 | 1905 | 100 | Plus |
CG13993-RA | 381 | CG13993-PA | 1..381 | 17..397 | 1905 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:46:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13993-RB | 575 | CG13993-RB | 123..504 | 17..398 | 1910 | 100 | Plus |
CG13993-RA | 595 | CG13993-RA | 143..524 | 17..398 | 1910 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:46:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 6069557..6069767 | 188..398 | 1055 | 100 | Plus |
2L | 23513712 | 2L | 6069345..6069489 | 45..189 | 725 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:46:49 has no hits.
BS12446.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:47:21 Download gff for
BS12446.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13993-RA | 1..381 | 17..397 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:35:15 Download gff for
BS12446.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13993-RA | 108..502 | 6..402 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:09:34 Download gff for
BS12446.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13993-RA | 143..517 | 17..391 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:47:21 Download gff for
BS12446.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13993-RA | 108..502 | 6..402 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:27:19 Download gff for
BS12446.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13993-RA | 143..517 | 17..391 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:27:19 Download gff for
BS12446.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 6069221..6069250 | 17..46 | 100 | -> | Plus |
2L | 6069347..6069489 | 47..189 | 100 | -> | Plus |
2L | 6069559..6069760 | 190..391 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:09:34 Download gff for
BS12446.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 6069221..6069250 | 17..46 | 100 | -> | Plus |
arm_2L | 6069347..6069489 | 47..189 | 100 | -> | Plus |
arm_2L | 6069559..6069760 | 190..391 | 100 | | Plus |
BS12446.pep Sequence
Translation from 16 to 396
> BS12446.pep
MAQMDIELKKAFTEMQINKLETTKKIHMIDMKCDMVKTGKQKYQLTEKGT
SSLADDTRVYQSVGRMFLLTDVQNMREDLKARQEKCDKAIELLEKKKEFL
QKSLKSQEDGLRELVQQRKEADQTAK*
BS12446.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:26:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13993-PB | 126 | CG13993-PB | 1..126 | 1..126 | 629 | 100 | Plus |
CG13993-PA | 126 | CG13993-PA | 1..126 | 1..126 | 629 | 100 | Plus |