BS12449.complete Sequence
959 bp assembled on 2006-11-01
GenBank Submission: FJ637185
> BS12449.complete
GAAGTTATCAGTCGACATGTTTAAGCTAACGATGCTGATGGGCCTGGCCC
TCATCCTGGCCCCATCAACGATCCAGGCCAAGTCCCTGTGCCGCAGCAGC
GGCTACTTCGCCCTAGTGGATAACACACCCGACTTCTATGCCTGCCAGTC
AACCGCCTACGGTGGCTACTCTCTGCGCTTCCTGCGCTGCCCCGCTGGTC
TGGTCTTCAGCTCCTCGATGGCCCAGTGCGTTCAGTCCATTGCCGCTTTC
GAGGCTCGTGATGATAGCAACATCGAGAACCCTACCATTCCGCCGAGCAA
CCTGGATGAGAGCACCACTGAGAAACCAGCCACTGAGGCACCTGGCACAA
CCGAGAAAGTAACCACTGCGGCACCTGGCACCACTGAGAAAGTAACCACT
GAGGCACCTGGCACCACTGAGAAAATAACCACTGAGGCACCTGGAACCAC
CGAGAAAATAACCACTGAGGCACCTGGAACCACCGAGAAAATAACCACTG
AGGCACCTGGAACCACCGAGAAAATAACCACTGAGGCTCCTGGAACCACT
GAAAAGCCCGCCACCGATGCTCCCGGCACCACCGAAAAACCAGCCACGGA
TGCACCTGGAACCACTGAGAAATCAGAAACTACTGATGCTCCCGGCACCA
CGGATAAATCAGATACTGATGCTCCCATTACCGACGAGCCGTCAACCGCT
GAGACCAGTACCGATGAGCCCAACACCGAGACCACTGAAAGCGGCGAAGA
GACCACCATCGAGGACAATGTGTGCGCCACCACCGGACTATTCCCGACGG
GCAGCTGCACGCACTTCATCGTCTGCAGCTACGCCGAAGGGGACGAGCTG
AAGGCCTACACGAAGAAGTGTCCTGGCGAGATGCAGTTCGATCCCTTCAA
CAGCGTTTGCTCAGCGTCTTACGACTGCACTGCAGGAAACTAAAAGCTTT
CTAGACCAT
BS12449.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 23:33:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Muc18B-RB | 927 | CG7876-PB | 1..927 | 17..943 | 4635 | 100 | Plus |
Muc18B-RA | 927 | CG7876-PA | 1..927 | 17..943 | 4635 | 100 | Plus |
Muc18B-RB | 927 | CG7876-PB | 296..615 | 345..667 | 905 | 86.1 | Plus |
Muc18B-RB | 927 | CG7876-PB | 329..651 | 312..631 | 905 | 86.1 | Plus |
Muc18B-RA | 927 | CG7876-PA | 296..615 | 345..667 | 905 | 86.1 | Plus |
Muc18B-RA | 927 | CG7876-PA | 329..651 | 312..631 | 905 | 86.1 | Plus |
Muc18B-RB | 927 | CG7876-PB | 296..587 | 378..672 | 735 | 84.1 | Plus |
Muc18B-RB | 927 | CG7876-PB | 362..656 | 312..603 | 735 | 84.1 | Plus |
Muc18B-RA | 927 | CG7876-PA | 296..587 | 378..672 | 735 | 84.1 | Plus |
Muc18B-RA | 927 | CG7876-PA | 362..656 | 312..603 | 735 | 84.1 | Plus |
Muc18B-RB | 927 | CG7876-PB | 296..507 | 411..622 | 580 | 84.9 | Plus |
Muc18B-RB | 927 | CG7876-PB | 395..606 | 312..523 | 580 | 84.9 | Plus |
Muc18B-RA | 927 | CG7876-PA | 296..507 | 411..622 | 580 | 84.9 | Plus |
Muc18B-RA | 927 | CG7876-PA | 395..606 | 312..523 | 580 | 84.9 | Plus |
Muc18B-RB | 927 | CG7876-PB | 298..474 | 446..622 | 420 | 82.5 | Plus |
Muc18B-RB | 927 | CG7876-PB | 430..606 | 314..490 | 420 | 82.5 | Plus |
Muc18B-RA | 927 | CG7876-PA | 298..474 | 446..622 | 420 | 82.5 | Plus |
Muc18B-RA | 927 | CG7876-PA | 430..606 | 314..490 | 420 | 82.5 | Plus |
Muc18B-RB | 927 | CG7876-PB | 463..606 | 314..457 | 300 | 80.6 | Plus |
Muc18B-RB | 927 | CG7876-PB | 298..441 | 479..622 | 300 | 80.6 | Plus |
Muc18B-RA | 927 | CG7876-PA | 298..441 | 479..622 | 300 | 80.6 | Plus |
Muc18B-RA | 927 | CG7876-PA | 463..606 | 314..457 | 300 | 80.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 23:33:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Muc18B-RB | 1146 | CG7876-RB | 45..975 | 13..943 | 4640 | 99.9 | Plus |
Muc18B-RA | 1068 | CG7876-RA | 45..975 | 13..943 | 4640 | 99.9 | Plus |
Muc18B-RB | 1146 | CG7876-RB | 344..663 | 345..667 | 905 | 86.1 | Plus |
Muc18B-RB | 1146 | CG7876-RB | 377..699 | 312..631 | 905 | 86.1 | Plus |
Muc18B-RA | 1068 | CG7876-RA | 344..663 | 345..667 | 905 | 86.1 | Plus |
Muc18B-RA | 1068 | CG7876-RA | 377..699 | 312..631 | 905 | 86.1 | Plus |
Muc18B-RB | 1146 | CG7876-RB | 344..635 | 378..672 | 735 | 84.1 | Plus |
Muc18B-RB | 1146 | CG7876-RB | 410..704 | 312..603 | 735 | 84.1 | Plus |
Muc18B-RA | 1068 | CG7876-RA | 344..635 | 378..672 | 735 | 84.1 | Plus |
Muc18B-RA | 1068 | CG7876-RA | 410..704 | 312..603 | 735 | 84.1 | Plus |
Muc18B-RB | 1146 | CG7876-RB | 344..555 | 411..622 | 580 | 84.9 | Plus |
Muc18B-RB | 1146 | CG7876-RB | 443..654 | 312..523 | 580 | 84.9 | Plus |
Muc18B-RA | 1068 | CG7876-RA | 344..555 | 411..622 | 580 | 84.9 | Plus |
Muc18B-RA | 1068 | CG7876-RA | 443..654 | 312..523 | 580 | 84.9 | Plus |
Muc18B-RB | 1146 | CG7876-RB | 346..522 | 446..622 | 420 | 82.5 | Plus |
Muc18B-RB | 1146 | CG7876-RB | 478..654 | 314..490 | 420 | 82.5 | Plus |
Muc18B-RA | 1068 | CG7876-RA | 346..522 | 446..622 | 420 | 82.5 | Plus |
Muc18B-RA | 1068 | CG7876-RA | 478..654 | 314..490 | 420 | 82.5 | Plus |
Muc18B-RB | 1146 | CG7876-RB | 346..489 | 479..622 | 300 | 80.6 | Plus |
Muc18B-RB | 1146 | CG7876-RB | 511..654 | 314..457 | 300 | 80.6 | Plus |
Muc18B-RA | 1068 | CG7876-RA | 346..489 | 479..622 | 300 | 80.6 | Plus |
Muc18B-RA | 1068 | CG7876-RA | 511..654 | 314..457 | 300 | 80.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 23:33:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 19215559..19216489 | 13..943 | 4640 | 99.9 | Plus |
X | 23542271 | X | 19215858..19216177 | 345..667 | 905 | 86.1 | Plus |
X | 23542271 | X | 19215891..19216213 | 312..631 | 905 | 86.1 | Plus |
X | 23542271 | X | 19215858..19216149 | 378..672 | 735 | 84.1 | Plus |
X | 23542271 | X | 19215924..19216218 | 312..603 | 735 | 84.1 | Plus |
X | 23542271 | X | 19215858..19216069 | 411..622 | 580 | 84.9 | Plus |
X | 23542271 | X | 19215957..19216168 | 312..523 | 580 | 84.9 | Plus |
X | 23542271 | X | 19215860..19216036 | 446..622 | 420 | 82.5 | Plus |
X | 23542271 | X | 19215992..19216168 | 314..490 | 420 | 82.5 | Plus |
X | 23542271 | X | 19215860..19216003 | 479..622 | 300 | 80.6 | Plus |
X | 23542271 | X | 19216025..19216168 | 314..457 | 300 | 80.6 | Plus |
Blast to na_te.dros performed on 2014-11-27 23:33:34 has no hits.
BS12449.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:44:28 Download gff for
BS12449.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7876-RA | 1..927 | 17..943 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:19:06 Download gff for
BS12449.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7876-RA | 39..976 | 9..950 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:31:49 Download gff for
BS12449.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Muc18B-RA | 55..973 | 23..941 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:44:29 Download gff for
BS12449.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7876-RA | 39..976 | 9..950 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:03:14 Download gff for
BS12449.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Muc18B-RA | 55..973 | 23..941 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:03:14 Download gff for
BS12449.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 19215569..19216487 | 23..941 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:31:49 Download gff for
BS12449.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 19109602..19110520 | 23..941 | 100 | | Plus |
BS12449.pep Sequence
Translation from 16 to 942
> BS12449.pep
MFKLTMLMGLALILAPSTIQAKSLCRSSGYFALVDNTPDFYACQSTAYGG
YSLRFLRCPAGLVFSSSMAQCVQSIAAFEARDDSNIENPTIPPSNLDEST
TEKPATEAPGTTEKVTTAAPGTTEKVTTEAPGTTEKITTEAPGTTEKITT
EAPGTTEKITTEAPGTTEKITTEAPGTTEKPATDAPGTTEKPATDAPGTT
EKSETTDAPGTTDKSDTDAPITDEPSTAETSTDEPNTETTESGEETTIED
NVCATTGLFPTGSCTHFIVCSYAEGDELKAYTKKCPGEMQFDPFNSVCSA
SYDCTAGN*
BS12449.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:38:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Muc18B-PB | 308 | CG7876-PB | 1..308 | 1..308 | 1615 | 100 | Plus |
Muc18B-PA | 308 | CG7876-PA | 1..308 | 1..308 | 1615 | 100 | Plus |
Sgs3-PA | 307 | CG11720-PA | 84..260 | 89..262 | 233 | 38.3 | Plus |
Sgs3-PA | 307 | CG11720-PA | 43..249 | 59..261 | 232 | 33 | Plus |
Sgs3-PA | 307 | CG11720-PA | 98..265 | 89..257 | 228 | 38.5 | Plus |
Sgs3-PA | 307 | CG11720-PA | 40..229 | 90..261 | 226 | 36.1 | Plus |
Mur2B-PB | 1144 | CG14796-PB | 557..736 | 84..258 | 221 | 34.4 | Plus |
CG43332-PA | 628 | CG43332-PA | 324..488 | 90..247 | 220 | 40.8 | Plus |
CG43332-PA | 628 | CG43332-PA | 353..514 | 103..261 | 198 | 40.8 | Plus |
CG43332-PA | 628 | CG43332-PA | 364..532 | 85..247 | 196 | 38.6 | Plus |
CG43332-PA | 628 | CG43332-PA | 394..547 | 90..240 | 179 | 41.2 | Plus |
CG43332-PA | 628 | CG43332-PA | 249..452 | 90..256 | 169 | 34.8 | Plus |
Sgs3-PA | 307 | CG11720-PA | 27..160 | 121..256 | 157 | 36 | Plus |