BS12450.complete Sequence
515 bp assembled on 2006-11-01
GenBank Submission: FJ638845
> BS12450.complete
GAAGTTATCAGTCGACATGGCCGCCTTCATGGAGGAAGCGTTAGTGGAGG
CGAGGCGGGCACGTGACGCCGGCGAGGTGCCCGTGGGCTGTGTGTTCGTT
CATGGGGACAAGGTGGTCGCACGTGGCGGGAACGAGGTGAACGTCCACCG
GAACGCCACTCGCCACGCGGAATTCATTTGCATCGACGCTATCCTCGCCA
GCTGCCGCGAGAGACGTCTGCCGGCCCGCCAGCTGTTCAGCGAGATCACC
GTGGTGGTCACCGTGGAGCCCTGCATTATGTGCTCCGCCGCCCTGCACAC
TCTGGGCGTCAAGGAGATCATCTACGGCTGTGAGAACGATCGTTTCGGAG
GAAAGACGGTCGTGGATGTGGCCGCCGTCGTTGGCCATAGGATCGAGATC
ACGGGCGGTGTGCGGGCGGATGAGGCGATGGCTCTGCTAAAGGATTTCTA
CAAGGGCGACAATCCGGCGGCACCGCCACAGGCCAAGAAGAAAAAGTAGA
AGCTTTCTAGACCAT
BS12450.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 23:43:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5292-RB | 483 | CG5292-PB | 1..483 | 17..499 | 2415 | 100 | Plus |
CG5292-RA | 483 | CG5292-PA | 1..483 | 17..499 | 2415 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 23:43:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5292-RB | 1855 | CG5292-RB | 114..596 | 17..499 | 2415 | 100 | Plus |
CG5292-RA | 1191 | CG5292-RA | 114..596 | 17..499 | 2415 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 23:43:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 17151974..17152456 | 17..499 | 2415 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 23:43:56 has no hits.
BS12450.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:47:18 Download gff for
BS12450.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5292-RA | 1..483 | 17..499 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 04:35:14 Download gff for
BS12450.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5292-RA | 109..591 | 17..499 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:36:34 Download gff for
BS12450.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5292-RA | 114..581 | 17..484 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:47:18 Download gff for
BS12450.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5292-RA | 109..591 | 17..499 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:07:04 Download gff for
BS12450.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5292-RA | 114..581 | 17..484 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:07:04 Download gff for
BS12450.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 17151974..17152441 | 17..484 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:36:34 Download gff for
BS12450.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 12977696..12978163 | 17..484 | 100 | | Plus |
BS12450.pep Sequence
Translation from 16 to 498
> BS12450.pep
MAAFMEEALVEARRARDAGEVPVGCVFVHGDKVVARGGNEVNVHRNATRH
AEFICIDAILASCRERRLPARQLFSEITVVVTVEPCIMCSAALHTLGVKE
IIYGCENDRFGGKTVVDVAAVVGHRIEITGGVRADEAMALLKDFYKGDNP
AAPPQAKKKK*
BS12450.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:27:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5292-PB | 160 | CG5292-PB | 1..160 | 1..160 | 825 | 100 | Plus |
CG5292-PA | 160 | CG5292-PA | 1..160 | 1..160 | 825 | 100 | Plus |