BS12453.complete Sequence
380 bp assembled on 2006-11-01
GenBank Submission: FJ637188
> BS12453.complete
GAAGTTATCAGTCGACATGTCTCTGCAGTCGGACGCCGTTTTCCAAAAGA
TCATCGATGGACTGAAGGAGAACGAGGCCAAGGCCAAGGCGGTCAACGGT
GTGTTCCTGTACAAAATCACCAAGGACGGCAAGGTGGCCAAGGAGTGGAC
TCTGGACTGCAAGAACGCCAAGGCCTACGAGGGACCTGCCCAGGGCATCA
AGGTGGACACCACCTTGACGGTCGCCGACGAGGACATGGTTGACATCGCC
CTGGGCAAGCTGAACCCCCAGGCTGCCTTCATGAAGGGCAAGCTGAAGAT
CGCCGGCAACATCATGCTCACCCAGAAGCTGGCGCCGCTCCTGAAGACCG
ACGCCAAGTTGTAAAAGCTTTCTAGACCAT
BS12453.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:39:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11151-RB | 348 | CG11151-PB | 1..348 | 17..364 | 1740 | 100 | Plus |
| CG11151-RA | 348 | CG11151-PA | 1..348 | 17..364 | 1740 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:39:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11151-RB | 1066 | CG11151-RB | 198..548 | 16..366 | 1755 | 100 | Plus |
| CG11151-RA | 705 | CG11151-RA | 148..498 | 16..366 | 1755 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:39:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 13740678..13740894 | 150..366 | 1085 | 100 | Plus |
| X | 23542271 | X | 13739979..13740112 | 16..149 | 670 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 00:39:13 has no hits.
BS12453.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:47:19 Download gff for
BS12453.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11151-RA | 1..348 | 17..364 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 01:58:53 Download gff for
BS12453.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11151-RA | 141..498 | 9..366 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:56:43 Download gff for
BS12453.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11151-RA | 149..494 | 17..362 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:47:20 Download gff for
BS12453.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11151-RA | 141..498 | 9..366 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:24:11 Download gff for
BS12453.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11151-RA | 149..494 | 17..362 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:24:11 Download gff for
BS12453.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 13739980..13740112 | 17..149 | 100 | -> | Plus |
| X | 13740678..13740890 | 150..362 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:56:43 Download gff for
BS12453.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 13634013..13634145 | 17..149 | 100 | -> | Plus |
| arm_X | 13634711..13634923 | 150..362 | 100 | | Plus |
BS12453.pep Sequence
Translation from 16 to 363
> BS12453.pep
MSLQSDAVFQKIIDGLKENEAKAKAVNGVFLYKITKDGKVAKEWTLDCKN
AKAYEGPAQGIKVDTTLTVADEDMVDIALGKLNPQAAFMKGKLKIAGNIM
LTQKLAPLLKTDAKL*
BS12453.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 00:27:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11151-PB | 115 | CG11151-PB | 1..115 | 1..115 | 576 | 100 | Plus |
| CG11151-PA | 115 | CG11151-PA | 1..115 | 1..115 | 576 | 100 | Plus |
