BS12459.complete Sequence
680 bp assembled on 2007-10-17
GenBank Submission: FJ637191
> BS12459.complete
GAAGTTATCAGTCGACATGGGCAGCAACTCCAAGGCAGACCCCATCTCGC
TGACCTTCCACGACTCCTGCCTGCGGATGTCCGACGTCCAGTTGCTCCAC
GGCCCGCACTGGCTGAACGACCAGATCCTGAGCTTCTACTACGAATACCT
GGCCCACATGAAGTACAAGACCAATGCGGATCTGCACTTCATTGCGCCGG
AGATTACGCAGTGTATGAAGTACATGGGCGACCAGGAGCTGAAGCAGCTT
CTCGACCAGAGCAACACCACTGGCAAGCCCTTTATCTTCTTCGCGCTGAA
CGACAACGAAACCACCGATGCTGGTGGCAGCCACTGGTCACTGTTGGTCT
TCTCGCGTCCGGAGAAGACCTTCTATCACTTCGATTCGTATGGGAACAAC
AACACGGGCAACTCCCTGGAGCTGATGAACAAGATCAAGGACCTGCTTGG
CGTCCGAATGGCCAAATTCCGGCCCATGCGCTGCCTACAGCAGGCGAACG
GCTACGACTGTGGCATCCATGTTATCTGCATGACCGACCACATTGCCGAT
TACCTAAACAGATACGAGGTGATCGACGGACTGCCGTCGCTGCACATCGA
CACCGTGAAGGCGAAGCGCACCGAGCTACTGAAACTCATCCTGTCGCTGG
GCGGCAAGGGCTAGAAGCTTTCTAGACCAT
BS12459.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:48:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Den1-RC | 750 | CG8493-PC | 103..750 | 17..664 | 3240 | 100 | Plus |
Den1-RA | 648 | CG8493-PA | 1..648 | 17..664 | 3240 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:48:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Den1-RC | 1161 | CG8493-RC | 223..875 | 17..669 | 3250 | 99.8 | Plus |
Den1-RA | 1257 | CG8493-RA | 319..971 | 17..669 | 3250 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 16:48:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 12338606..12339258 | 17..669 | 3250 | 99.8 | Plus |
Blast to na_te.dros performed on 2014-11-27 16:48:01 has no hits.
BS12459.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:14:59 Download gff for
BS12459.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8493-RB | 1..648 | 17..664 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 01:52:56 Download gff for
BS12459.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8493-RB | 141..799 | 17..675 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:58:45 Download gff for
BS12459.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Den1-RA | 319..966 | 17..664 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-04 16:42:01 Download gff for
BS12459.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8493-RB | 141..788 | 17..664 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:27:16 Download gff for
BS12459.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Den1-RA | 319..966 | 17..664 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:27:16 Download gff for
BS12459.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 12338606..12339253 | 17..664 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:58:45 Download gff for
BS12459.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 8226111..8226758 | 17..664 | 100 | | Plus |
BS12459.pep Sequence
Translation from 16 to 663
> BS12459.pep
MGSNSKADPISLTFHDSCLRMSDVQLLHGPHWLNDQILSFYYEYLAHMKY
KTNADLHFIAPEITQCMKYMGDQELKQLLDQSNTTGKPFIFFALNDNETT
DAGGSHWSLLVFSRPEKTFYHFDSYGNNNTGNSLELMNKIKDLLGVRMAK
FRPMRCLQQANGYDCGIHVICMTDHIADYLNRYEVIDGLPSLHIDTVKAK
RTELLKLILSLGGKG*
BS12459.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:32:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Den1-PA | 215 | CG8493-PA | 1..215 | 1..215 | 1156 | 100 | Plus |
Den1-PC | 249 | CG8493-PC | 35..249 | 1..215 | 1156 | 100 | Plus |
CG1503-PB | 307 | CG1503-PB | 88..299 | 10..213 | 324 | 35.8 | Plus |
CG1503-PA | 307 | CG1503-PA | 88..299 | 10..213 | 324 | 35.8 | Plus |