BS12462.complete Sequence
563 bp assembled on 2006-11-01
GenBank Submission: FJ637193
> BS12462.complete
GAAGTTATCAGTCGACATGAATCAAGCCGATGTAACAAAGCTCATGTCAC
AGCTGCGTATAGCGGTCAGGCCCAACAAGCGCCATCTGAAGAATGTCGAT
GGCCCGGAAGGTCGGCTGCTGAAGCTGCGTAAGACCGTCACTGCGTTGGT
GAAGCACGAGCGTATTGAACTGTTCTACAACCGTGCCGATGAAGCTCGTG
GCTACGCCGAACTGCTCATTTCCAATGCCATACGCCATGGGGACCGACAC
CAAGCCACCATGGAACTGGCGGACTATTGGCTGCTGGAAAAGCAACTGGT
TCATAAGCTCTTCAAGGTGCTGGTACCGCGCTATGAGACTTACAATGTGT
CCTACACTCGCATGTACAAAGCCCCTCGGGAGTATCCTGGCATTTACTAC
AGGCGGTCTGTGCTGGAGCTTCGGGGCAATCCCTACCCTTCGCTGGCGGC
GGATCATTCTCAGAACCGGAATCTGCTGCACAATGTGCTTCTGGACGAGG
CGAGAAAGGAGTTTAGGCGTCAAAAACTGTCGGAGTTAGTTCACTAAAAG
CTTTCTAGACCAT
BS12462.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:16:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mRpL17-RB | 531 | CG13880-PB | 1..531 | 17..547 | 2655 | 100 | Plus |
| mRpL17-RA | 531 | CG13880-PA | 1..531 | 17..547 | 2655 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:16:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mRpL17-RB | 1092 | CG13880-RB | 74..609 | 17..552 | 2665 | 99.8 | Plus |
| mRpL17-RA | 756 | CG13880-RA | 74..609 | 17..552 | 2665 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:16:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 265111..265449 | 214..552 | 1680 | 99.7 | Plus |
| 3L | 28110227 | 3L | 264852..265049 | 17..214 | 990 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 01:16:36 has no hits.
BS12462.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:44:32 Download gff for
BS12462.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL17-RA | 1..531 | 17..547 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:19:11 Download gff for
BS12462.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL17-RA | 61..614 | 7..560 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:44:44 Download gff for
BS12462.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL17-RA | 74..602 | 17..545 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:44:32 Download gff for
BS12462.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL17-RA | 61..614 | 7..560 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:49:37 Download gff for
BS12462.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL17-RA | 74..602 | 17..545 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:49:37 Download gff for
BS12462.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 264852..265049 | 17..214 | 100 | -> | Plus |
| 3L | 265112..265442 | 215..545 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:44:44 Download gff for
BS12462.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 264852..265049 | 17..214 | 100 | -> | Plus |
| arm_3L | 265112..265442 | 215..545 | 100 | | Plus |
BS12462.pep Sequence
Translation from 16 to 546
> BS12462.pep
MNQADVTKLMSQLRIAVRPNKRHLKNVDGPEGRLLKLRKTVTALVKHERI
ELFYNRADEARGYAELLISNAIRHGDRHQATMELADYWLLEKQLVHKLFK
VLVPRYETYNVSYTRMYKAPREYPGIYYRRSVLELRGNPYPSLAADHSQN
RNLLHNVLLDEARKEFRRQKLSELVH*
BS12462.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:38:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mRpL17-PB | 176 | CG13880-PB | 1..176 | 1..176 | 910 | 100 | Plus |
| mRpL17-PA | 176 | CG13880-PA | 1..176 | 1..176 | 910 | 100 | Plus |
