BS12492.complete Sequence
932 bp assembled on 2006-11-01
GenBank Submission: FJ637207
> BS12492.complete
GAAGTTATCAGTCGACATGGCTAGCAAAAAGTACAGTGACGTGAATCTTT
ACGATCTTCTGGGCATTTCTCTCGAGTCTGATCAAAATGAGATACGCAAG
GCGTACCGCAAGAAGGCCCTCGAGTGCCATCCCGACAAGAATCCGGACAA
TCCGAAGGCAGTCGAGCGCTTCCATGAGTTGTCCAAGGCTCTGGAGATCC
TCACGGATGAATCCGCGCGCGCAGCTTATGACAAAGTGCTGAAGGCCAAG
AAGGCGGCGGAGCTGAGGAGTCGCCAACTGGACGGGAAGCGGCAGAAGCT
GAAGCTGGAACTGGAGGAACGTGAACGGGCGGCACTGCACAAACTGGCGA
AGAGCCAACCCTACAGCACGGTGGCCAAAAGCGACGAGGAGGTGCTGCAT
GAGCAGATCGAGCGGTTGCGACGCGAGGGCTCCCGTCTGCTGGAGGAGGA
GCAGCGAGCCATGCAGGAGCAGTTCCGGCGGAATCACGCGGAGCAACAGA
AACTGCAGCAACAGCCGGTCCAGTTTGATTCCGCCCAGCATCGCATCAAG
ATGAAGTGGAAGGCCGAACCTGGCCAGGATTACACACAGCAAGAGCTGCT
CAAGTATCTGAAGAAGTACGGCGACGTGGTGGCCCTGGTGGTCAACAGCA
AGCGACGCGGACGCGCCATGGTGGAGCTGGCCACGCGCGAAGCCTGCGAC
ATGGTCTTGGCCTACGAAAAAGGCGATCCCGCCAAGCCGCTGCACTTCGA
GTGGGTAACGCCGCCGGCGGCAGACAAGCAGACAACCAAATCGGCCACCA
CTGGGTGCAGTGCGTCATCCACCGACTACGAGGACCTGGTCATGCGAAAG
CTGCGCCAAGCTGAGGAACGTAAGAGACTCATTGAGCAGATGATGAAGGA
CGAGGAGGGCGAATGAAAGCTTTCTAGACCAT
BS12492.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 23:38:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17187-RA | 900 | CG17187-PA | 1..900 | 17..916 | 4500 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 23:38:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17187-RA | 1263 | CG17187-RA | 172..1073 | 17..918 | 4510 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 23:38:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 11230807..11231708 | 918..17 | 4510 | 100 | Minus |
Blast to na_te.dros performed 2014-11-27 23:38:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6651..6791 | 372..515 | 110 | 54.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6734..6899 | 437..599 | 110 | 54.2 | Plus |
BS12492.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:44:09 Download gff for
BS12492.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17187-RA | 1..900 | 17..916 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:18:43 Download gff for
BS12492.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17187-RA | 139..1050 | 7..918 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 19:34:18 Download gff for
BS12492.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17187-RA | 172..1070 | 17..915 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:44:09 Download gff for
BS12492.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17187-RA | 139..1050 | 7..918 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:05:14 Download gff for
BS12492.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17187-RA | 172..1070 | 17..915 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:05:14 Download gff for
BS12492.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 11230810..11231708 | 17..915 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 19:34:18 Download gff for
BS12492.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 7056532..7057430 | 17..915 | 100 | | Minus |
BS12492.pep Sequence
Translation from 16 to 915
> BS12492.pep
MASKKYSDVNLYDLLGISLESDQNEIRKAYRKKALECHPDKNPDNPKAVE
RFHELSKALEILTDESARAAYDKVLKAKKAAELRSRQLDGKRQKLKLELE
ERERAALHKLAKSQPYSTVAKSDEEVLHEQIERLRREGSRLLEEEQRAMQ
EQFRRNHAEQQKLQQQPVQFDSAQHRIKMKWKAEPGQDYTQQELLKYLKK
YGDVVALVVNSKRRGRAMVELATREACDMVLAYEKGDPAKPLHFEWVTPP
AADKQTTKSATTGCSASSTDYEDLVMRKLRQAEERKRLIEQMMKDEEGE*
BS12492.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:39:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17187-PA | 299 | CG17187-PA | 1..299 | 1..299 | 1519 | 100 | Plus |
| mrj-PA | 259 | CG8448-PA | 2..67 | 9..73 | 171 | 51.5 | Plus |
| mrj-PC | 259 | CG8448-PC | 2..67 | 9..73 | 171 | 51.5 | Plus |
| mrj-PB | 259 | CG8448-PB | 2..67 | 9..73 | 171 | 51.5 | Plus |
| mrj-PD | 259 | CG8448-PD | 2..67 | 9..73 | 171 | 51.5 | Plus |
