BS12495.complete Sequence
794 bp assembled on 2006-11-01
GenBank Submission: FJ637209
> BS12495.complete
GAAGTTATCAGTCGACATGGAAACTAATGTAGATTTCAGCAGCATTTCAT
CCAAGTTGTACAGAAAGTACGCGCAACATGTGAGAAACCTAAAGGACGTG
TGCGTATCCAAGACGGTGATGAAACCGGGGGCCTTCTTTGACAGCCTGCA
GCAGATGATGGAGGAGGAGGCAGCAGCCACTACGCCCCCGAGGGATCTTA
GCTCGGTAGCCGACTATGCGGAGCTCTTCAAGACCTTGGAAGAGTACCCG
GCCAACCTGCAGAAAATGCCCAAGAAGCGGGAGCTACAACGTACCAACTC
AACGCTCCTGCGAGGAGCAGACGAGTCGGTGGCCATGGGCATCAACACAT
CCAACGTTTCGCTGAGTCTGACGCGTCTGGAGGAGCAGCGCAGTGCCGTG
GACGTGTACAATGATTTTAAGGGTTTCCAGCGAAAGCTGGCCAAGATCTA
CGACGAGGCAGCCGCTCTGGACACCACAGAATCCATATACAAGCAGAAGC
TGACGCAGCTCCATGGATTTGCGCAGCAGCTGGAAAAGCTCATGCCAACC
GGCGGTGAGTCTCCGCCAGATGCTTTTACATCCGAGCAGCAGGAGAAGCT
TCTGACCATAGCCGCCAATATGGAACAGCTCAACTACCTGCGCTCCAACA
GCCTCCAGCTGCCCAATCCCAATGAGATACTCGCCACCGGGAGTCTTGCC
GCTCGCCTGGAGATGTTCGTAGAGGTGCTTACCTATACGCTTCTCCAAGT
CAGCAGCTACAATATGGCCATGATTTGAAAGCTTTCTAGACCAT
BS12495.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:42:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| msd5-RA | 762 | CG2213-PA | 1..762 | 17..778 | 3810 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:42:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| msd5-RA | 840 | CG2213-RA | 34..797 | 17..780 | 3820 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 14:42:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 1332350..1333113 | 780..17 | 3820 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 14:42:10 has no hits.
BS12495.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:42:41 Download gff for
BS12495.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2213-RA | 1..762 | 17..778 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 01:54:54 Download gff for
BS12495.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2213-RA | 32..803 | 9..780 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:49:47 Download gff for
BS12495.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| msd5-RA | 34..794 | 17..777 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:42:42 Download gff for
BS12495.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2213-RA | 32..803 | 9..780 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:17:01 Download gff for
BS12495.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| msd5-RA | 34..794 | 17..777 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 15:17:01 Download gff for
BS12495.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 1332353..1333113 | 17..777 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:49:47 Download gff for
BS12495.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 1332353..1333113 | 17..777 | 100 | | Minus |
BS12495.pep Sequence
Translation from 16 to 777
> BS12495.pep
METNVDFSSISSKLYRKYAQHVRNLKDVCVSKTVMKPGAFFDSLQQMMEE
EAAATTPPRDLSSVADYAELFKTLEEYPANLQKMPKKRELQRTNSTLLRG
ADESVAMGINTSNVSLSLTRLEEQRSAVDVYNDFKGFQRKLAKIYDEAAA
LDTTESIYKQKLTQLHGFAQQLEKLMPTGGESPPDAFTSEQQEKLLTIAA
NMEQLNYLRSNSLQLPNPNEILATGSLAARLEMFVEVLTYTLLQVSSYNM
AMI*
BS12495.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 23:39:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| msd5-PA | 253 | CG2213-PA | 1..253 | 1..253 | 1260 | 100 | Plus |
