BS12523.complete Sequence
1091 bp assembled on 2006-11-01
GenBank Submission: FJ637213
> BS12523.complete
GAAGTTATCAGTCGACATGATGCACACATTCGAGAACACCTTCATCCGTG
GACCATCGCCGTCATATTCCGACGACGCCAACTCGGAGAACGCGCTCTCT
GTGACGCTGCCCATTGGAGGAGTTGTGCCGGACTTGGACTTTTGTCGCGA
CGACTCGAAAACGGATACGGGCGATTACTTCGATGAGAAGTACAACAGCG
ACAGCTGCTCCCGCCTGCATCCGGGTCACCAGGGACGCAACACGTTCGCC
TTCTGGACCATTGTGGTGTTGCTGCTGGTGCTGACCGTTGGCAATCTTCT
GCTGACGCTCACCATTGTGGGTGTGCTTCGCCTGGGCAAAGGTGTCCAGG
GCATGGAGGTGATACCCGAGGTGGATTTGGTGAAGTTCTACGGTACCACG
GACTTGGAGCGCGTGCAGACGAACTCGATTGGCCAGATACACGGCTTCTC
GGATGTCCCGGTGACCATCAGCAGTGATGCTGGTGACGGCGAGGGCGGCG
TCCATGTGCGCGTCTTCCGCAATGGCAATGGAGCAGCCAGCGAACGCGAT
AGGATCGTCCTGAACAGGGAGGGTATCCTCGTGCAGGCCACGAACTTGTT
CGAGGTCAAGGACCCCGTCGACAAGCAGCCGATTTTCACCACCCATCGTC
CGCAGTATAACATTCCGGGCGGAGTGGAGGCGCTGCAGGCCAAAGTGGTT
AGTGCCAGCGGCATCGTCAGTCCCATCGACGAGTCCCTGGTGCTGGAGAG
CGACGGACGCATGGCCATCAGGGGATCCGAGGGCGTCTACTTCGACGGAG
CCAGCGTTGACATGCAGGCCGAGCACCACATTCTCATCAACTCCACGCAG
GGCGCCACCATCCTGGAGGCAGGCACGGGTATCTTTCTGGACATGGACCG
CATTCCCATCGTCAGCTCCGAGCTGGGTCTCCGCACGGGCAGTGTGCAGT
ACAAGATTTGCGTGTGCATGCCGCATGGAACGCTCTTCCGGATCGCCATA
CCCAGGGTACACAACGGACCCAAGATCACATGCGCCCACTTCAGCGGCAA
GGACGATCCCTGCGAGATCAACTAAAAGCTTTCTAGACCAT
BS12523.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:09:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Scgbeta-RA | 1059 | CG5657-PA | 1..1059 | 17..1075 | 5295 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:09:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Scgbeta-RA | 1194 | CG5657-RA | 87..1145 | 17..1075 | 5295 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:09:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 12421285..12422343 | 1075..17 | 5295 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 01:09:23 has no hits.
BS12523.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:44:15 Download gff for
BS12523.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Scgbeta-RA | 1..1059 | 17..1075 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:18:51 Download gff for
BS12523.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Scgbeta-RA | 79..1156 | 8..1087 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:40:34 Download gff for
BS12523.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Scgbeta-RA | 87..1143 | 17..1073 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:44:15 Download gff for
BS12523.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Scgbeta-RA | 79..1156 | 8..1087 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:46:00 Download gff for
BS12523.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Scgbeta-RA | 87..1143 | 17..1073 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:46:00 Download gff for
BS12523.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 12421287..12422343 | 17..1073 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:40:34 Download gff for
BS12523.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 8247009..8248065 | 17..1073 | 100 | | Minus |
BS12523.pep Sequence
Translation from 16 to 1074
> BS12523.pep
MMHTFENTFIRGPSPSYSDDANSENALSVTLPIGGVVPDLDFCRDDSKTD
TGDYFDEKYNSDSCSRLHPGHQGRNTFAFWTIVVLLLVLTVGNLLLTLTI
VGVLRLGKGVQGMEVIPEVDLVKFYGTTDLERVQTNSIGQIHGFSDVPVT
ISSDAGDGEGGVHVRVFRNGNGAASERDRIVLNREGILVQATNLFEVKDP
VDKQPIFTTHRPQYNIPGGVEALQAKVVSASGIVSPIDESLVLESDGRMA
IRGSEGVYFDGASVDMQAEHHILINSTQGATILEAGTGIFLDMDRIPIVS
SELGLRTGSVQYKICVCMPHGTLFRIAIPRVHNGPKITCAHFSGKDDPCE
IN*
BS12523.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:38:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Scgbeta-PA | 352 | CG5657-PA | 1..352 | 1..352 | 1832 | 100 | Plus |
