Clone Sequence Records
BS12537.complete Sequence
347 bp assembled on 2010-07-02
GenBank Submission: KX804241
> BS12537.complete
GAAGTTATCAGTCGACATGCGGCGCGCATCTCGATTGATTCCGTTCGGTT
TCGTCATCCTGCTCCTGATTCTTCTGCTCCTCCAGCCATCGACAGACGGC
CACACACTGGGCGCCAGCTGCCAGACGCCCGAGAAGAGCGAAGGACGCTG
TGTGCACTTCAGCTCCTGCCGGCTCGTCTTGCGTCACTATGCGATGTACA
AGGAGCACATGCCGCCAGCGATAATGCGATTCCTGCAGAGGGTCCGTTGC
AAGCCGAAACGCGAAGGCTATCATTTGTGCTGCGAACTCAAAGATGTGAT
TCCCGCGAACGCCAACTCCAAGTTGAAGTAAAAGCTTTCTAGACCAT
BS12537.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:18:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31337-RA | 315 | CG31337-PA | 1..315 | 17..331 | 1575 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:18:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31337-RA | 849 | CG31337-RA | 186..501 | 17..332 | 1580 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:18:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 13544546..13544706 | 268..108 | 805 | 100 | Minus |
3R | 32079331 | 3R | 13545125..13545215 | 107..17 | 455 | 100 | Minus |
3R | 32079331 | 3R | 13544314..13544377 | 332..269 | 320 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:18:13 has no hits.
BS12537.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-09-09 16:57:04 Download gff for
BS12537.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31337-RA | 170..482 | 17..329 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:16:03 Download gff for
BS12537.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31337-RA | 170..482 | 17..329 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:26:14 Download gff for
BS12537.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31337-RA | 186..498 | 17..329 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:26:14 Download gff for
BS12537.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 13544317..13544377 | 269..329 | 100 | <- | Minus |
3R | 13544546..13544706 | 108..268 | 100 | <- | Minus |
3R | 13545125..13545215 | 17..107 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:16:03 Download gff for
BS12537.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 9370039..9370099 | 269..329 | 100 | <- | Minus |
arm_3R | 9370268..9370428 | 108..268 | 100 | <- | Minus |
arm_3R | 9370847..9370937 | 17..107 | 100 | | Minus |
BS12537.5prime Sequence
308 bp (308 high quality bases) assembled on 2010-02-21
> BS12537.5prime
TCCGTTCGGTTTCGTCATCCTGCTCCTGATTCTTCTGCTCCTCCAGCCAT
CGACAGACGGCCACACACTGGGCGCCAGCTGCCAGACGCCCGAGAAGAGC
GAAGGACGCTGTGTGCACTTCAGCTCCTGCCGGCTCGTCTTGCGTCACTA
TGCGATGTACAAGGAGCACATGCCGCCAGCGATAATGCGATTCCTGCAGA
GGGTCCGTTGCAAGCCGAAACGCGAAGGCTATCATTTGTGCTGCGAACTC
AAAGATGTGATTCCCGCGAACGCCAACTCCAAGTTGAAGTAAAAGCTTTC
TAGACCAT
BS12537.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2015-02-10 15:36:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31337-RA | 849 | CG31337-RA | 209..501 | 1..293 | 1465 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-02-10 15:36:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 13544546..13544706 | 229..69 | 805 | 100 | Minus |
3R | 32079331 | 3R | 13545125..13545192 | 68..1 | 340 | 100 | Minus |
3R | 32079331 | 3R | 13544314..13544377 | 293..230 | 320 | 100 | Minus |
Blast to na_te.dros performed on 2015-02-10 15:36:05 has no hits.
BS12537.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-21 04:42:25 Download gff for
BS12537.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31337-RA | 193..485 | 1..293 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-13 12:20:14 Download gff for
BS12537.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31337-RA | 193..485 | 1..293 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-02-10 17:36:43 Download gff for
BS12537.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31337-RA | 209..501 | 1..293 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-02-10 17:36:43 Download gff for
BS12537.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 13544314..13544377 | 230..293 | 100 | <- | Minus |
3R | 13544546..13544706 | 69..229 | 100 | <- | Minus |
3R | 13545125..13545192 | 1..68 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-13 12:20:14 Download gff for
BS12537.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 9370036..9370099 | 230..293 | 100 | <- | Minus |
arm_3R | 9370268..9370428 | 69..229 | 100 | <- | Minus |
arm_3R | 9370847..9370914 | 1..68 | 100 | | Minus |
BS12537.pep Sequence
Translation from 16 to 330
> BS12537.pep
MRRASRLIPFGFVILLLILLLLQPSTDGHTLGASCQTPEKSEGRCVHFSS
CRLVLRHYAMYKEHMPPAIMRFLQRVRCKPKREGYHLCCELKDVIPANAN
SKLK*
BS12537.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:33:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31337-PA | 104 | CG31337-PA | 1..104 | 1..104 | 554 | 100 | Plus |