BS12547.complete Sequence
1178 bp assembled on 2006-11-01
GenBank Submission: FJ637215
> BS12547.complete
GAAGTTATCAGTCGACATGACGCTCAAAATCGGTATATGCACCAAGCAGG
ATCTCGACGAGGCGATGAAGCTGCAGAAGCGGGAGCAGTACGAAGATGAG
CGGAAGCGGCGCATTTTTAATGCCAAACAGCGTCTTTACGGGCTCGACCT
AGAAATGCTGGATCGCCAAATACTTGAGAAAAAGAAGCAGCGAACCGCCC
AGATGGAGTGCGACAAGAAATTTGAAGAACAGGAGCAGCTGCAGAAGCGT
CTGATCCTGGCCCAGGAAATGGAGTTGGAGAAAAAACAGCGTGTGGTGGA
CTCGGATCTTAACTATTATCGCTGCCGCTATCAGCGCAAGGAGCAGCGCC
GCGAATTCGACCTAAATGATCCGAATTTCTTGAAGAAGGCACGTCCAACA
AGAGTCGCCGACAATGACATTTCGCTGGGCGTGTCCAGTGCCCAGATCTT
TCAAGGCGAGGACCTCTATAACTCTGACAGAAAGCAGCGGCAGCGGGAGC
AGCAAAGAGCCTGGCTGGATCAGCAAGTGCAGGAGCGTAAGAGGGCGGAG
GATGCTCGCAAGCAGGCCGATAATGTGTTGATGGACAACGTTGGTTGCAG
AGACAAGCATCTGCAGGAGATGGCCAAGTCTGATCACCAGATGCGCAACC
AAGTCATCCAGCGAGTGCGTCAGTTCAATATCAACATGGCCAAGCAGAAG
CAATTGGACCGCGAAAGGGAAAAGCGTGAAAAGTACGAGGATGACATGGC
CGAGATCTATAACATGCTCTCCAGCGATATGCTAACTGAAAATCCGGATG
TGGCTCAATCGCGCACCGATCCGAACAAGAAGATTGCCTTCATGTATCGC
GGCATGACGCCCGAAGAACTTCGCGTGTTTCGTCTTGGACAAGATCAGCA
GCTTCGTTTGTCTATTCAGCGCAAGACGGAGGCCCAGATGATGGACAAAC
AGTGGGAGCAATACTCCATTAATATGGACCGCACCCTGGTCCTTCACCAA
ATCGAGGATGATCGCCGACGTAAGGCGGAATTCGATGAGCTGATGCGGGC
GAATTCCAAGTTGGCCGTGGAGCAGGATCGCCAGCGCAAGGAAGCCCTTG
TGGGCCTAACCAATGCCGTCTCCGATGACTTTTACGATCAGTTCAACAAG
AACTCACGTTAGAAGCTTTCTAGACCAT
BS12547.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:25:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7264-RB | 1146 | CG7264-PB | 1..1146 | 17..1162 | 5730 | 100 | Plus |
| CG7264-RA | 1146 | CG7264-PA | 1..1146 | 17..1162 | 5730 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:25:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7264-RB | 1412 | CG7264-RB | 59..1204 | 17..1162 | 5730 | 100 | Plus |
| CG7264-RA | 1700 | CG7264-RA | 347..1492 | 17..1162 | 5730 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 16:25:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 11829616..11830636 | 142..1162 | 5105 | 100 | Plus |
| 3L | 28110227 | 3L | 11829435..11829560 | 17..142 | 630 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 16:25:56 has no hits.
BS12547.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:44:01 Download gff for
BS12547.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7264-RA | 1..1146 | 17..1162 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:18:30 Download gff for
BS12547.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7264-RA | 338..1499 | 8..1169 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:56:19 Download gff for
BS12547.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7264-RA | 347..1492 | 17..1162 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:44:01 Download gff for
BS12547.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7264-RA | 338..1499 | 8..1169 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:18:19 Download gff for
BS12547.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7264-RA | 347..1492 | 17..1162 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 17:18:19 Download gff for
BS12547.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 11829435..11829560 | 17..142 | 100 | -> | Plus |
| 3L | 11829617..11830636 | 143..1162 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:56:19 Download gff for
BS12547.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 11822535..11822660 | 17..142 | 100 | -> | Plus |
| arm_3L | 11822717..11823736 | 143..1162 | 100 | | Plus |
BS12547.pep Sequence
Translation from 16 to 1161
> BS12547.pep
MTLKIGICTKQDLDEAMKLQKREQYEDERKRRIFNAKQRLYGLDLEMLDR
QILEKKKQRTAQMECDKKFEEQEQLQKRLILAQEMELEKKQRVVDSDLNY
YRCRYQRKEQRREFDLNDPNFLKKARPTRVADNDISLGVSSAQIFQGEDL
YNSDRKQRQREQQRAWLDQQVQERKRAEDARKQADNVLMDNVGCRDKHLQ
EMAKSDHQMRNQVIQRVRQFNINMAKQKQLDREREKREKYEDDMAEIYNM
LSSDMLTENPDVAQSRTDPNKKIAFMYRGMTPEELRVFRLGQDQQLRLSI
QRKTEAQMMDKQWEQYSINMDRTLVLHQIEDDRRRKAEFDELMRANSKLA
VEQDRQRKEALVGLTNAVSDDFYDQFNKNSR*
BS12547.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:45:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7264-PB | 381 | CG7264-PB | 1..381 | 1..381 | 1950 | 100 | Plus |
| CG7264-PA | 381 | CG7264-PA | 1..381 | 1..381 | 1950 | 100 | Plus |
