BS12558.complete Sequence
482 bp assembled on 2006-11-01
GenBank Submission: FJ637217
> BS12558.complete
GAAGTTATCAGTCGACATGTTGAGCATCACGGCCCGTAACCTGGCAAGCG
CCCTCCGCAGCAGCCTCGTCGGCACATCGTCGCGCGTGGCCGCCGTGCGC
TGTCTGCACGGAACCGAGGAATCGGCGGAGGAGTTCGACAAGCGCTACGA
GAAGTACTTCAGCCGTGAGGGCATCGATGGCTGGGAGATCCGCAAGGGCA
TGAACGATCTGCTGGGCATGGATCTGGTGCCCAGCCCCAAGATCATCGAG
GCCGGTCTGCGTGCCAGCCGTCGCGTCAACGACATTGCACTGGCCATCAG
GTGGCTGGAGGGATGCAAGGACAAGTGCGGCGACCAAAAGGCCACCCTCT
ATCCCTACTTGCTGGAGAAGATCACCCCCACACTGCAGGAGCTGGGCATC
CCAACCATCGAGGAACTGGGCTACGACAAGCCCGAATTGGCCCTGAAGTC
CGTGTACGATGCCTAAAAGCTTTCTAGACCAT
BS12558.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 00:17:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CoVa-RC | 450 | CG14724-PC | 1..450 | 17..466 | 2250 | 100 | Plus |
| CoVa-RB | 450 | CG14724-PB | 1..450 | 17..466 | 2250 | 100 | Plus |
| CoVa-RA | 450 | CG14724-PA | 1..450 | 17..466 | 2250 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 00:17:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CoVa-RC | 635 | CG14724-RC | 46..497 | 15..466 | 2260 | 100 | Plus |
| CoVa-RA | 730 | CG14724-RA | 141..592 | 15..466 | 2260 | 100 | Plus |
| CoVa-RB | 701 | CG14724-RB | 113..563 | 16..466 | 2255 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 00:17:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 11819711..11820161 | 16..466 | 2255 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 00:17:56 has no hits.
BS12558.complete Sim4 Records
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 23:44:03 Download gff for
BS12558.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CoVa-RB | 1..450 | 17..466 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:18:33 Download gff for
BS12558.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CoVa-RA | 136..594 | 10..470 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 20:21:54 Download gff for
BS12558.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CoVa-RA | 148..590 | 22..464 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:44:03 Download gff for
BS12558.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CoVa-RA | 136..594 | 10..470 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:29:28 Download gff for
BS12558.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CoVa-RA | 148..590 | 22..464 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 01:29:28 Download gff for
BS12558.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 11819717..11820159 | 22..464 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 20:21:54 Download gff for
BS12558.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 7645439..7645881 | 22..464 | 100 | | Plus |
BS12558.pep Sequence
Translation from 16 to 465
> BS12558.pep
MLSITARNLASALRSSLVGTSSRVAAVRCLHGTEESAEEFDKRYEKYFSR
EGIDGWEIRKGMNDLLGMDLVPSPKIIEAGLRASRRVNDIALAIRWLEGC
KDKCGDQKATLYPYLLEKITPTLQELGIPTIEELGYDKPELALKSVYDA*
BS12558.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:45:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CoVa-PC | 149 | CG14724-PC | 1..149 | 1..149 | 762 | 100 | Plus |
| CoVa-PB | 149 | CG14724-PB | 1..149 | 1..149 | 762 | 100 | Plus |
| CoVa-PA | 149 | CG14724-PA | 1..149 | 1..149 | 762 | 100 | Plus |
