BS12575.complete Sequence
410 bp assembled on 2006-11-01
GenBank Submission: FJ637221
> BS12575.complete
GAAGTTATCAGTCGACATGTCGACCGCTTCGCGAGTGACTTTGGGACTGG
CGGTCTCCATTTCCACAGCGATCATAGGTTATGTGCACTATAAACAATCG
GCAGACCGCCTGAGACTGCACGATGGTGTCCTGAGGGACGTTGAGCAGCA
ACAACGGCGCAAACACGAGAATACCTACACGCTGCAGCAGCAAATAGACA
TGACCAAGCAACTGAAAGCCAGGGAGGCGTCTAGCAACTCCTCTGACACG
CCCGTACCTCCATCGACGCATCGCGCACAGAGTAATCTTCAAGCGGAGAA
GCCAGCAGTGCAAAATGAAGGCGAGGCTTTCAGAGGTGTTCCTCAGGGTG
GAACGACTAATCACGATGGAAGCCCGCCAACTGACATAGCTTGAAAGCTT
TCTAGACCAT
BS12575.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:51:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11562-RA | 378 | CG11562-PA | 1..378 | 17..394 | 1890 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:51:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11562-RA | 748 | CG11562-RA | 150..528 | 16..394 | 1895 | 100 | Plus |
U2af38-RB | 1655 | CG3582-RB | 1612..1655 | 394..351 | 220 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:51:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 292716..293002 | 108..394 | 1435 | 100 | Plus |
2L | 23513712 | 2L | 292568..292660 | 16..108 | 465 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 13:51:40 has no hits.
BS12575.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 03:18:13 Download gff for
BS12575.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11562-RA | 99..481 | 9..394 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:34:06 Download gff for
BS12575.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11562-RA | 151..527 | 17..393 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 23:43:48 Download gff for
BS12575.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11562-RA | 99..481 | 9..394 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:28:07 Download gff for
BS12575.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11562-RA | 151..527 | 17..393 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:28:07 Download gff for
BS12575.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 292569..292660 | 17..108 | 100 | -> | Plus |
2L | 292717..293001 | 109..393 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:34:06 Download gff for
BS12575.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 292569..292660 | 17..108 | 100 | -> | Plus |
arm_2L | 292717..293001 | 109..393 | 100 | | Plus |
BS12575.pep Sequence
Translation from 16 to 393
> BS12575.pep
MSTASRVTLGLAVSISTAIIGYVHYKQSADRLRLHDGVLRDVEQQQRRKH
ENTYTLQQQIDMTKQLKAREASSNSSDTPVPPSTHRAQSNLQAEKPAVQN
EGEAFRGVPQGGTTNHDGSPPTDIA*
BS12575.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:45:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11562-PA | 125 | CG11562-PA | 1..125 | 1..125 | 637 | 100 | Plus |